KEGG   Populus alba (white poplar): 118038863
Entry
118038863         CDS       T07314                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
palz  Populus alba (white poplar)
Pathway
palz03082  ATP-dependent chromatin remodeling
palz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118038863
   03083 Polycomb repressive complex
    118038863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118038863
Enzymes [BR:palz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118038863
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118038863
   HDAC complexes
    Sin3A-HDAC complex
     118038863
    BRAF-HDAC complex
     118038863
    REST complex
     118038863
    SHIP complex
     118038863
    MiDAC complex
     118038863
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118038863
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118038863
  Chromatin remodeling factors
   NuRD complex
    118038863
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118038863
NCBI-ProteinID: XP_034901230
LinkDB
Position
4:21048802..21052200
AA seq 500 aa
MDTGGNSLPSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ
TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYSKGKYYSLNVPLDDG
IDDESYHFLFKPLIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME
NKNSHQVLEEIRCKLLDNLSKLQHAPSVQFQERVPDTELPEAEEEQNEADERWDPDSDMD
VDEERKPLPGRVKREIVEAEPKESEGQKGSSGHARGFDTTIAENASGKAQDAGPKQIDEA
GVRVEQENVNKASDQMFSKS
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggacactggtggcaactctctcccgtccgctgctcctgacggggttaagagaaaggtt
tgctatttctacgatccagaagtcggcaattactattatggccaaggtcaccccatgaag
ccccaccgcattcgaatgacccatgctctgcttgcccactatggtttgcttcagcacatg
caggtcctcaagccctttcctgctcgcgaccgggatctttgtcgcttccatgccgatgat
tatgtctctttcctccgcagcattacccctgagacgcagcaggaccagctcaggcagctc
aagcgctttaatgtcggtgaagattgccctgtttttgatggcctctactccttctgccag
acttatgcaggtggatctgttggtggtgccgttaagttaaatcacaacctctgtgacatt
gctgtcaattgggctggtggcctccatcatgctaagaagtgtgaggcttctggtttttgt
tatgtcaatgacatcgtgcttgcaatcctggagcttcttaaagtgcatgagcgtgttctg
tatgtggatatcgacattcatcacggtgacggtgtggaggaagcattttacaccactgat
agagtcatgactgtttcattccataaatttggagattattttcccggcactggggatgta
cgtgatattggatattcaaaaggaaaatactactctcttaatgttccgttggatgatggg
attgatgatgagagctatcatttcttgttcaaaccactaattggaaaagtaatggaagtt
tttaagccgggtgctgtggttctccaatgtggtgctgactcattatccggggatagatta
ggatgcttcaatctttcaatcaagggccatgcagagtgtgttaaatttatgagatctttt
aatgtgccattattgctattgggtggtggtggctacaccattcgaaatgtcgctcgctgc
tggtgctatgagactggagttgcacttggaatagaagttgatgataagatgcctcagcat
gagtattatgagtacttcggtccagattatactcttcatgttgcccctagcaacatggaa
aataagaattcccaccaggtacttgaggaaatccggtgcaagctccttgataatctttca
aagcttcagcatgcacccagtgtccaatttcaggaaagagtacctgatactgagcttcca
gaggcagaagaagaacagaatgaagcagatgagagatgggatccagattccgacatggat
gttgatgaagaacgcaagccattaccaggcagagtcaagagagaaatagttgaagctgag
ccaaaagagtcggagggccagaaaggaagttctgggcatgctagaggctttgatacaaca
atagccgagaatgcaagtggaaaggctcaggatgctggtcctaagcaaattgatgaggca
ggtgtgagagttgagcaggagaacgtgaacaaggcatctgatcagatgttctccaagtca
tga

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