Populus alba (white poplar): 118039122
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Entry
118039122 CDS
T07314
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118039122
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118039122
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
U-box type E3
118039122
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118039122
NCBI-ProteinID:
XP_034901622
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Position
1:14498516..14505648
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AA seq
855 aa
AA seq
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MAVYYKFKSARDYDSISMDGPFISVGTLKEKVFESKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRQPIVTEQEPKLETKVEDTLPEKGSFTGADSSAMNFTEDNE
WDEFGNDLYSIPDALPVQSNNPPPDVVPTNKADEDDRIKALIDTPALDWQRQGADGFGAG
RGFGRGFAGRMGGRGFGLQRKTPPQGYVCHRCKLPGHFIQHCSTNGDPNYDIKRVRPPTG
IPKSMLMATPDGSYALPSGAVAVLKPNEAAFEKEIEGFPSTRPVGDLPPELHCPLCKEVM
KDAVLTSKCCFTSFCDKCIRDYIIEQSKCVCGVLNVLADDLLPNKTLRDTINHILESGNS
SAENAGSTFPVLDMESARCPPPKVPSPTRSVASKGEQHKLSPGNAESPNLNKEITEETKP
AIASQQVPEKVRTAKAVDVSEATHESMSVKEPASQGSAPLPEEEVQQKLVPIEAGKKKKR
KKVCMPPNDSWRASHDLAAESYVMPMGPSAFNPYWSGMQPGMEGYMPPYPGPMPYMGYGL
SPLDIPFGGVYALQIPFGAQGYMMPIVPPQRDLAGFGMNMNLGPPLMSREEFEARKADVR
RRHENERRAEREFSRDRALGREVSSSGDVSSMKSKSRPQSSGDPHHHHRRRSERSSPERS
ARELDLLPPRPSKRKSDHHHEHSDRDADDFEYHKRDRSDRDHRHHPRNRSESSSKAVSET
TTKPASTTATDRNHKLSVFSRISFPAEEEPASKKRKVSSSSEAAPAGGGGGPASSAHHKS
SSPVNNGYYDDYKSSSVKARTSSSSAAAAAMDYESSDDDRHFKRKPSRCEPSPPPPVEWQ
EDNKRSRREKDRRHR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtattacaaatttaagagtgctagagattatgattcaatctcaatggacggt
ccatttatttccgttggtaccttgaaagaaaaagtttttgaatcaaagcatttgggaagg
ggtactgacttcgaccttgttgtcactaatgcccaaaccaatgaagagtatcttgatgaa
gcaatgttaattcccaaaaatacctctgtattaatacgccgggttccaggaaggcctcgc
cagcccattgttacagagcaagagccaaagttggaaactaaagtggaggacacccttcca
gagaagggtagttttacaggtgctgattcatctgccatgaatttcactgaagacaacgaa
tgggatgagtttggaaatgatttatattccattcctgatgcactgcctgttcagtctaat
aatccacctcctgatgtggtccctacaaacaaggctgacgaggatgacagaattaaggca
ctaattgatactccagctttggactggcagcgtcaaggtgctgatggctttggtgctggt
agaggttttggaaggggatttgctggaagaatgggtgggcgtggttttggcttgcagcgg
aaaacacctccacaaggctatgtatgccacagatgcaagcttcctgggcattttattcaa
cactgctctacaaatggtgaccctaattacgatattaaaagagtaaggcctccaactggt
attccaaagtcaatgctgatggcgaccccagatggctcatatgctttacctagtggcgca
gttgctgttttgaagccaaatgaggcagcttttgagaaagaaattgaaggctttccttcc
acacggcctgttggtgatcttccacctgaacttcactgcccactttgtaaggaagttatg
aaggatgcagtcttaacaagcaaatgctgtttcacaagcttctgtgacaagtgtataaga
gattacatcattgaacagtcaaagtgtgtatgtggggtattaaatgtccttgcggatgat
cttcttcctaacaagactcttagggatacgatcaatcatattttggagtccggtaacagt
agtgctgaaaatgcaggaagtacctttccagttctagatatggagtctgcacgctgccca
ccaccaaaggttccatcacccacacggtctgttgcatccaagggagaacaacataagctg
tctcctggtaatgcagaatctccaaatttaaacaaggaaataacagaggagacgaagcct
gctattgcttctcagcaagtccctgagaaagtgaggactgccaaagctgtggatgtatct
gaggctacccacgagtcgatgagtgtgaaggagccagcgtcacaaggaagtgctccactg
cctgaggaagaagtgcagcagaagttggttcctattgaggctgggaagaaaaagaaaagg
aagaaagtttgcatgcctccaaatgattcgtggagagcttctcacgatcttgcagctgag
agctatgtgatgcccatgggtccctctgcctttaatccgtattggagtggcatgcaacct
ggaatggaaggatacatgcctccttatccaggtccaatgccatatatgggttacggatta
agtcccttggacattccatttgggggtgtttatgccctccagattccttttggagcccag
ggttatatgatgcctattgttccacctcagagggatcttgctggatttggaatgaatatg
aatctcggacctcctctaatgagcagggaggaatttgaggcccgcaaagctgatgtcagg
agacgtcatgaaaatgagagacgagctgagagggagttttccagagatcgggcattgggt
agggaagtgagcagcagtggtgatgtttcttcaatgaaatctaagtcaagaccacaatcc
agcggcgatccccaccaccatcaccgtcgccggtctgagagatcttcaccagaacggtca
gcacgagagcttgaccttttaccaccgcgcccgtctaaaagaaagtccgaccaccaccat
gaacacagcgacagggatgctgatgattttgaatatcacaagcgggatcgcagtgaccgt
gatcaccgccaccacccccgcaatcgctcagaatcctcttccaaagctgtctctgagaca
accactaagccagcttcaacaacagcaacagaccgcaatcataaattaagtgtgttctct
cgcattagctttccagcagaagaagaacccgccagtaagaagcgcaaggtttcttcctct
agtgaagcagcaccagcgggtggcggcggcggccctgcatcttctgcacatcacaagtca
tcatctccagttaataatggctactatgatgactataagtcatcttctgtgaaagctaga
acgagcagtagcagtgctgctgcagctgccatggattacgagtccagtgatgatgacagg
cactttaagaggaagccctctaggtgtgagccatcaccaccacctccagtagagtggcag
gaggataataagcgttcaagaagggaaaaggaccggaggcatagatag
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