Populus alba (white poplar): 118039123
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Entry
118039123 CDS
T07314
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118039123
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118039123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_14
Motif
Other DBs
NCBI-GeneID:
118039123
NCBI-ProteinID:
XP_034901624
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Position
1:complement(14511715..14526407)
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AA seq
792 aa
AA seq
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MEDDTGDKSSIVIGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYDPV
VVIVPPNKFAPDGMLGVSDLVDRFYASVKKVVMARCCFDDTKGAVLIKNLAATEPSALGL
DTYYKQYYLCLAAAAATIKWIEAEKGVIVTNHSLLVTFNGSFDHMSIDATSVQNLEIIEP
FHSSLLGTNNKKRSLFHMLKTTKTTGGTRLLRANLLQPLKDIKTINTRLDCLDELMSNEQ
LFFGLSQALRKFPKEIDRILCHFCFKPKRVTNEVLGADNARRSQVLISSIILLKTALDAL
PLLSKALKNAKSFLLANVYKTICENEKYVSIRKRVGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEFKLPNLKLPFNNRQGFYFSIPQKDIQGK
LPSKFIQVLKHGNNIHCSTLELASLNVRNKSAAAECYIRTEVCLEALLNSIREDASALTL
LAEVLCLLDMIINSFAYTISTKPVDRYTRPEFTSNGPLAIDAGRHPILESIHNDFVPNNI
FLSEASNMIIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTIRVVDRIFTRMGSVD
NLESNSSTFMTEMKETAFIMQNVSERSLIFMDELGRATSSSDGFAIAWSCCEHLLSLKAY
SIFATHMENLSELATIYPNVRIVHFHVDIKSNRLDFKFQLEDGPRHVPHYGLLLAEVAGL
PSSVIEMARSITSKITEKQIKQMEVNCRQHHQLQMVYRVAQRLICLKHSSQDEDSIRQAL
QNLKEQYINGTL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatacaggagataaatcaagcattgtgatcggcctcatagagaacagagcc
aaagaggttggaatggctgcttttgatttaaggtcagcctcactgcatctgtctcagtat
atcgaaactagcagctcctatcagaatacaaaaactctgctccaattttatgatcctgtg
gtggtcattgttcctccaaacaaatttgcacctgatggcatgctcggagtttcagatctg
gtcgatcggttttatgcttcagtcaaaaaggtagtaatggcccgttgttgctttgatgac
accaagggtgctgtactaattaaaaatctagcagccacagagccttcagctcttggtttg
gatacttactacaagcaatactatctctgcttggctgctgctgcagctacaatcaagtgg
atagaagcagagaaaggggttatcgtcaccaaccactcattgttggttacttttaatgga
tcatttgatcatatgagtattgatgccaccagcgtccaaaatttagaaatcattgagcca
tttcattcttccctcttgggaacaaacaacaagaaaagaagtctattccacatgctcaag
acaacgaaaaccacaggagggactagacttctacgggccaatctgttgcagcctttaaaa
gatattaagactatcaacactcggcttgattgcctggacgaactaatgagcaatgaacag
ctgttttttggactttctcaggctttgcgtaagtttccaaaagagattgataggatactc
tgtcacttctgctttaaacctaaaagagtcactaatgaggtcttgggtgctgataatgct
cgaaggagccaagtgttgatatcaagcattattctacttaaaactgctttagatgccttg
cctttactctcaaaggcgcttaagaatgcaaaaagttttcttcttgcaaatgtttacaag
actatatgtgaaaatgagaaatatgtttccataagaaagagagtgggagaggtgattgac
gaagacgtgcttcatgcacgggttccctttgttgcccgaacacagcagtgttttgctgtc
aaggctggaattgatggacttctggatattgcacggagaacgttttgcgatactagtgaa
gcaatacataatcttgcaaacaagtatcgagaagaatttaagctgccaaatctgaaactt
ccatttaacaatagacaaggcttttactttagtattccacagaaagacatccagggaaag
cttcccagcaagttcattcaggtcctgaaacatgggaacaatatacattgctcaacttta
gaacttgcttcattgaacgtgagaaataagtctgctgctgcagagtgctatataagaaca
gaagtttgccttgaagccttattaaattccataagggaggatgcctctgcactaactctg
cttgcggaggtcttatgccttctagatatgatcattaattcatttgcttacacaatctca
acgaagcctgttgatagatacactagaccagaatttacaagtaatggcccattggcaatt
gatgctggaagacaccctatcctggaaagcatacacaatgattttgttcccaacaatatt
tttctatcagaagcatcaaacatgataattgtcatgggcccaaacatgagtgggaagagc
acttatcttcaacaagtgtgtctcatagttattcttgctcagattggttgttatgttcct
gctcgcttctcaactataagggtagttgatcgcatatttacaaggatgggttcggtagat
aatcttgaatcaaactccagtacgttcatgacagagatgaaggagactgcttttatcatg
cagaatgtctccgaaaggagtttaatctttatggatgaacttgggagagctacttcttca
tctgatggatttgcgattgcctggagctgctgcgaacatctgttatcactcaaagcgtat
tccatattcgctactcacatggagaacctatcagaactagcaaccatctatccaaatgtc
aggattgttcactttcatgttgacataaaaagcaaccgtttggattttaagtttcaactt
gaggacggaccaagacatgtaccgcactatggccttctattagcagaagtggctggactg
ccaagctcagtcattgaaatggctagaagcatcacatcaaagattacagaaaagcaaatt
aagcaaatggaagtgaactgcaggcagcaccatcagctgcagatggtgtatcgtgtagct
cagcgattgatatgcttaaagcactccagccaagatgaggattctatccggcaagcgtta
cagaatctcaaagagcagtacataaatggcacactttaa
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