KEGG   Populus alba (white poplar): 118039150
Entry
118039150         CDS       T07314                                 
Name
(RefSeq) ras-related protein Rab7 isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
palz  Populus alba (white poplar)
Pathway
palz04144  Endocytosis
palz04145  Phagosome
palz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:palz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118039150
   04145 Phagosome
    118039150
   04148 Efferocytosis
    118039150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:palz04131]
    118039150
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:palz04147]
    118039150
   04031 GTP-binding proteins [BR:palz04031]
    118039150
Membrane trafficking [BR:palz04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    118039150
Exosome [BR:palz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118039150
  Exosomal proteins of other body fluids (saliva and urine)
   118039150
  Exosomal proteins of colorectal cancer cells
   118039150
  Exosomal proteins of bladder cancer cells
   118039150
GTP-binding proteins [BR:palz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    118039150
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 cobW RsgA_GTPase nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_24 AAA_22 NACHT PduV-EutP nSTAND1 ATPase
Other DBs
NCBI-GeneID: 118039150
NCBI-ProteinID: XP_034901656
LinkDB
Position
5:6403736..6406552
AA seq 207 aa
MEMPRRALLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKEVQIDAKLVTLQ
IWDTAGQERFQSLGSAFYRGADCCVLVYDVNIQKSFEILNNWHKEFVKQADPVDPEAFPF
ILFGNKIDVDGGSSRVVSEKTAREWCASRGDIPYFETSAKEGYNVHEAFLCVAKMALAGE
HEQEHDIYFPGISETVSEVEQRGGCAC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggaaatgcctcgaagagcattactgaaggttatcgttctgggcgatagcggggtggga
aagacttctttgatgaatcaatacgtatataagaagtttagccagcagtataaagctacg
attggagctgattttgtcaccaaggaagtacagattgatgccaaactggtgactttgcaa
atatgggacacggcggggcaggagaggtttcagagtttaggatcagcgttttacagaggg
gcagattgctgtgttcttgtatacgatgtaaatatacagaaatcatttgaaatacttaat
aattggcataaggaatttgtcaaacaggcagatccagtcgatcctgaggcattccctttt
atattatttgggaacaaaatcgacgtagatggtggaagcagccgagtggtttcggagaaa
acggccagagaatggtgtgcttccaggggagacataccatactttgagacctcagcaaaa
gagggttacaatgttcatgaagcatttctttgtgttgcaaaaatggcactagcaggtgaa
catgaacaggaacatgacatttactttccgggtatatcagaaactgtttcagaagtcgag
caaaggggaggctgtgcgtgttga

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