Populus alba (white poplar): 118039511
Help
Entry
118039511 CDS
T07314
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118039511
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118039511
Enzymes [BR:
palz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118039511
Protein phosphatases and associated proteins [BR:
palz01009
]
HAD phosphatases
Fcp/Scp phosphatases
118039511
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118039511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
118039511
NCBI-ProteinID:
XP_034902106
LinkDB
All DBs
Position
11:complement(5442815..5452402)
Genome browser
AA seq
987 aa
AA seq
DB search
MYKSVVYKGEELLGEVEIYAQEQQQEEENKRKSVIDEIVKGIRISHFSQPSERCPPLAVL
HTITSIGVCFKMEESTASSSTKISSQQESPLRLLHSSCIQENKTAVMHLGGEELHLVAMP
SRSNERKHPCFWGFNVASGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDKIEALQ
KKISTEVDQQRILAIISEIKRYQDDKIILRQYLENDQVIENGKVIKTQLEVVPAVSDNHQ
PLVRPLIRLPEKNIIFTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAE
RDYALEMWRLLDPESNLINSNELLDRIVCVSSGSRKSLFNVFQDGICHPKMALVIDDRMN
VWDEKDQSRVHVVPAFAPYYAPQAEANNAVPILCVARNVACNVRGGFFKEFDEGLLQKIP
EVAYEDDTSNIPSPPDVSNYLVSEDDASAANGNRDPPSFDSTADAEVERRLKEAVSASST
IPSSLPSTVSSLDPRLLQSLQYAVASSSSLIPASQPSMLVSQQPVPASQTSMMPFPNTQF
PQVAPLVKQLGQVVHPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDSRDNAPSE
SPFPARPSAPVSAAHVQSRGSWVPVEEEMTPRQLNRTPREFPLDSDPMNIEKHQTHHPSF
FPKAESNIPSDRMIHENQRLPKEAPYRNDRMRLNHSTPNYHSFQVEETPLSRSSSNRDLD
LESERAFTIAETPVEVLQEIAMKCETKVEFRPALVASIDLQFSIEAWFAGEKVGEGTGKT
RGEAQRQAAEGSIKKLAGIYMLRVKPDSGPMHGDSSRYPSANNNGFLGNMNLFGNQPLPK
DELVAYSAASEPTRLLDPRLEGSKKSSGSVTALKEFCMMEGLGVNFLAQTPLSANSIPGE
EVHAQVEIDGQVLGKGIGSTWDEAKMQAAEKALGSLRRTFGQYTQKRQGSPRPTQGMPNK
RLKQEFPRALQRMPSSARYHKNAPPVP
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcagtggtgtataaaggagaggagttactgggagaagttgaaatttatgca
caagaacaacagcaagaagaagagaacaagaggaagagcgtaattgatgagatagtgaag
ggaatcagaattagccacttctcacaacctagtgagagatgtccaccacttgcagtgctt
catacaattacatctattggtgtttgcttcaaaatggaagagtcaacagcatcatcatca
acaaagatctcctctcaacaagaatcgccgcttcgccttttgcactcctcctgtatccaa
gaaaacaagactgcagtaatgcatctgggaggtgaggagctccatttggttgcaatgccc
tccaggagtaatgaaagaaagcatccatgtttctggggattcaatgttgcatcaggactt
tatgactcttgtcttgtcatgctgaacctcagatgccttggcattgtatttgatcttgat
gaaactctcatagttgcaaatacaatgcgctcatttgaagataaaattgaagctttgcag
aagaaaataagcaccgaggtggaccaacagcgaattcttgctattatttcagagatcaag
aggtatcaggatgacaagatcattttgaggcaatacttggaaaatgatcaggttattgaa
aatggaaaggtgatcaaaacacagcttgaggtcgttccggccgtgtctgacaaccatcaa
cctttggttcgcccattgatacggttgccagagaagaatataatttttactcgcatcaat
ccacagattcgtgatacaagtgtgcttgtgaggttgagacctgcctgggaggatcttaga
agctacttgactgcaagagggcgcaagcgctttgaggtttatgtttgcacaatggctgaa
agagattatgctttagaaatgtggaggcttttggatccagaatcaaacttgataaactca
aatgaattgctagatcggattgtgtgtgtcagctctggttcaagaaagtcattattcaat
gtctttcaagatggaatatgccatcctaagatggcacttgtgattgatgaccgcatgaac
gtgtgggatgagaaggatcaatcccgtgtgcacgtggttcctgcttttgctccttattat
gctcctcaagctgaagcaaataatgctgttccaatcttgtgcgttgcgagaaatgttgct
tgcaatgttagaggtggtttcttcaaagaatttgatgagggtcttctgcagaagatacct
gaggttgcatatgaagatgataccagtaatattccttctcctcctgatgtgagcaactac
ttagtttcggaggatgatgcttctgctgcaaatggaaaccgagatccaccttcttttgac
agcacagcagatgctgaggttgaaagacggctaaaggaagcagtttcagcttcttcaaca
atcccctcatcacttccttcaacagtcagcagcttagatccaaggcttcttcagtctctc
caatacgcagtggcatcttcttcaagcttgattccagcatcacaaccatcaatgctggta
tcacaacagccagtgccagcatcacaaacatcaatgatgccatttcccaacacacagttc
cctcaggtggctccattagttaaacagttaggccaggttgttcatccagaaccaagcttg
cagagttctcctgctcgagaagaaggtgaagtacctgaatctgaattagatcctgataca
aggaggcggcttctcatattacaacatgggcaagattcaagagacaatgcaccaagtgaa
tccccatttcctgcaagaccttcagcaccagtgtcagctgcacatgtgcaatctcgtgga
agctgggttccagtggaggaagagatgaccccaaggcaacttaaccgaacacccagagaa
tttcctctagattcagatccaatgaatattgaaaagcatcaaacccatcatccatccttt
tttcctaaggctgagagtaatattccatctgataggatgattcatgagaatcaaagactg
ccaaaagaggcaccttatagaaatgatcggatgaggctaaaccattcaactcccaattac
cattctttccaagtggaggagactccattgagtagatcatccagcaacagggaccttgac
ttggaatctgaacgagcgtttacaattgctgaaactccagttgaagttttgcaggaaatt
gcaatgaagtgtgaaaccaaggtggaattcaggcctgctttggttgctagcatagatctg
cagttctccattgaggcttggtttgcaggagaaaaggttggtgaaggaactggtaaaaca
agaggagaagcccaacgtcaggcagctgagggttctattaagaagttagctggcatatat
atgttgcgtgtgaagcctgattctgggcccatgcacggggattcaagtagatatcctagt
gcaaacaacaatggttttctgggtaatatgaatttatttggaaatcagccattgcctaaa
gatgagctagtagcatattcagctgcttcagagccaaccaggcttctggatccaaggctg
gaaggctctaagaaatcatcgggttctgtcactgcactcaaagaattttgcatgatggag
ggacttggagtaaattttttggcacagactccactttcagctaattcaattccaggagag
gaagtacatgcacaggttgaaatagatggacaggttcttgggaaggggattgggtcgaca
tgggatgaagctaagatgcaggctgctgaaaaggcccttggaagtctaagaagaacgttc
ggtcaatatacacagaaacgacagggttcccctaggccaacgcaagggatgccaaataaa
cgtctaaagcaagagtttccacgagccctgcagcgcatgccctcttctgctagatatcac
aagaatgctcctcctgttccttga
DBGET
integrated database retrieval system
