Populus alba (white poplar): 118039558
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Entry
118039558 CDS
T07314
Name
(RefSeq) protein TRANSPARENT TESTA 9 isoform X1
KO
K19513
protein CLEC16A
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118039558
03029 Mitochondrial biogenesis [BR:
palz03029
]
118039558
Membrane trafficking [BR:
palz04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118039558
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118039558
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
118039558
NCBI-ProteinID:
XP_034902174
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Position
18:14695258..14702998
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AA seq
861 aa
AA seq
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MWSSLWRSRDRFSLDELRYLIDQLQKVQIVNNVNKDFVIEALRSISELITYGDQHDSNYF
EFFMERQVMGEFVRILKVSRTVSVSRQLLQTMSIMIQNLKSEHAIYYLFSNEHINFLITY
AFDFKNEELLSYYISFLRAISVKLDKNTISLFVKTQNEEVVSFPLYVEAIRFAFHEENMI
RTAVRALTLNVYHVGDESVNRFVVKAPHADYFSNLLTYFRKQCIDLNGLVSETLKNPDSD
TTTAILAAVDEIEDDLYYISDVISAGIPDVGRLITDKIMQLLILPLLLPSLQLDAANDIQ
IGAITSLYLLCCILRIVKIKDLANTIAAALFCSPEAFIADSETKLNGYVPDHVHEIQQPE
NENVIEVNGCSKQIMQSLSSSSQVRTEDIISKGVSHSTLRDALLSYITVGDDLQVLGSLS
MLATLLQTKVELDEIMLDALGILPQRKQHKKLLLQALVGEDSREDQLFSLGSSSIRDEFN
CELDGHLQTLKDQYGVACSSLELGTTPSAHRFQVLHTLVSLFCRSNISPETLWDGGWLFR
QLLPYSEAEFNSQHLKLLKTSHTQDSYKNCTCDLLEETRGTWPDLLVSILRDEWKKCKRA
MEASSPPKEPKCILFPLEKSSADDVLPSESSIISGEKMCKVVKVFVLLHQLHIFSLGRAL
PDQPPTCLPSDIPENSRARTAGLDASGPKLGAELRLVDAVPCRIAFERGKERHFCFLAIS
VGTSGWILLAEELPLKKHYGIIRIVAPLAGSNPTIDEKHSRWLHLRIRPSTLPVLDPAKS
ITHGKAKTKALVDGRWTLAFRDDESCKTALSMIIEEFDLQSSEVKRRLNSLLNIEGSIDV
PDTSLQPSEASSSTQTPSNSS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcttccttgtggagatccagagatcgtttctccttagatgaactcagatattta
attgatcagctgcaaaaagttcaaattgtaaataatgttaataaggactttgtaatagag
gcgttgagatcgatatcggaattaataacgtacggagaccagcatgattcaaactatttt
gagttttttatggaaaggcaagtaatgggagagtttgtgaggatactaaaggttagtaga
actgtttcagtttcacgtcagttgctgcaaacgatgagcatcatgattcagaatttaaaa
tccgagcacgcaatatattatttgttcagtaatgagcatattaattttttgataacttat
gcatttgattttaagaatgaggagttgttgtcttactacatttctttcttgagggcaata
agtgtgaagcttgacaagaacacaatttctttgttcgtgaagacacaaaatgaagaagtt
gtttcatttccactgtatgttgaggctatacggtttgctttccatgaagagaatatgatc
cgtactgcagtccgtgctctgacacttaatgtctatcatgttggagatgaatctgtgaat
agatttgttgtgaaggcccctcatgctgattatttttcaaacttgcttacttatttccga
aagcagtgcattgatctaaatggattggtctctgaaactctaaaaaacccagactcagat
acaaccactgcgattcttgctgctgtggatgaaatagaggatgatctctactatattagt
gatgttatttcagcagggattcctgatgttgggagattaataacagacaaaattatgcaa
cttttgattcttcctttgcttcttccatctttgcagttggatgctgctaatgatattcag
attggcgctatcacttctctatatttgctctgttgcatcttacgcatagttaaaatcaaa
gatttggcaaataccattgctgctgctcttttctgttcaccggaggctttcattgcagat
tctgaaactaaactcaatggttatgtgcctgatcatgtgcatgaaatccagcagccagaa
aatgagaatgtgattgaggtgaatggatgttcaaaacagatcatgcagagcttgtctagt
tcttcccaagttcgtactgaagacattatctcaaaaggtgtttctcattcaactttgagg
gatgctttgctttcatatattacagttggagatgatcttcaagttctgggttctttgagc
atgctggctacgttgttgcaaacaaaagtagaattagatgaaataatgctagatgctctt
ggaattctcccccagcgcaagcaacacaagaaactcttactgcaagcattggttggcgag
gactcacgggaagatcaacttttttcgttaggaagcagctctataagagatgaatttaat
tgtgagcttgatggccatctacaaactctaaaggatcagtatggagtagcatgctcttct
ctggagttgggaacaaccccctctgcacatagatttcaggtactccacacattggttagt
cttttttgccgttcaaatatatctccggagacattgtgggatggtggttggctttttcgt
cagctacttccttatagtgaggcagaattcaatagccagcatcttaaattactcaaaact
tctcatacacaggattcttataagaattgcacatgtgatcttcttgaggagaccagaggt
acatggcctgatctacttgtgtccatcttacgtgatgaatggaaaaagtgcaaaagagca
atggaagcttcgtctcctccgaaagagccaaagtgcatactctttccattagagaagtcc
tctgctgatgatgttcttcccagtgaatcatcaattatttctggtgaaaaaatgtgcaag
gtggtgaaggtgtttgtacttcttcatcaacttcacattttctccctaggtagagcctta
cctgaccagcctcctacttgtcttccaagtgatatccctgaaaattcccgtgcaagaact
gctggcctggacgcttcaggtccaaaactaggtgccgagttgagactagttgatgccgtg
ccttgtaggattgcatttgagaggggtaaagaacgccatttttgctttttagcaatctct
gtgggcacatctgggtggatcctacttgcagaagaattacccttgaagaagcattatgga
atcatccgtattgttgctcctctggcaggttccaatcctacaattgatgagaagcattca
agatggttacacttgcggatccgtccatctactttgcctgttttggatcctgctaaatcc
attactcatgggaaggctaagacaaaagccctggttgatgggagatggaccttagcattc
agggatgacgaatcttgcaagactgcgttgtcgatgattattgaggagtttgatctgcaa
agcagtgaagtcaagagaagactaaattcattgctcaacattgaaggaagtatagatgta
ccagacacttctctacagccttctgaggcttcctcatcaactcaaacaccttccaattca
tcgtaa
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