Populus alba (white poplar): 118039623
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Entry
118039623 CDS
T07314
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00900
Terpenoid backbone biosynthesis
palz01100
Metabolic pathways
palz01110
Biosynthesis of secondary metabolites
Module
palz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
118039623
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
palz01006
]
118039623
Enzymes [BR:
palz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
118039623
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
118039623
2.5.1.29 geranylgeranyl diphosphate synthase
118039623
Prenyltransferases [BR:
palz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
118039623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
118039623
NCBI-ProteinID:
XP_034902268
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All DBs
Position
17:17744693..17745855
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AA seq
364 aa
AA seq
DB search
MAFSVTISCYDNLLLKNSINGLNTQPRACSLDQIKCFHMKTQATSAANPSFKQSFRAHEE
NKKTQKVPSPPFGFKEYMIQKGNQVNKALDAAVPLQHPRKIHEAMRYSLLAGGKRVRPIL
CIASCELVGGDEESAMSTACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAV
LAGDALLALAFEHVARNTKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLS
TLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSE
ELGKTAGKDLTSDKATYPKLIGVDEAKKFAAQLTDQANQELSFYDPVKAAPLYHLASYIA
SRQN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccttctctgtaacaatttcttgctacgacaatttacttctgaaaaactccatcaat
ggcctaaacacccaacctagagcctgctcattagaccagatcaagtgttttcacatgaaa
actcaagcaacctctgctgcaaacccatctttcaagcaatcgtttagagcccatgaagaa
aacaagaagacacaaaaggtcccttcaccgccattcggatttaaggagtacatgatccag
aaaggaaatcaagtgaacaaagcactagatgcggcagtgcccttgcaacatcccagaaaa
atccatgaagccatgagatattctctccttgcaggtggaaagcgtgttcgtccaatttta
tgcattgcttcgtgtgaattagtgggaggagatgaggaatcagcaatgtcgacggcttgt
gcactggagatgattcacaccatgtcactaatccatgatgatcttccttgtatggacaat
gatgatcttagacgaggtatgcccacaagccacaaagtttttggtgaagatacagcagtt
cttgctggtgatgcactcctagcccttgcctttgagcacgtagccagaaataccaagaat
gtctcgtcggaccgcgtggtccaggcccttgctgagcttggatccgctgttggatcaaaa
ggtctggtggcaggtcaggttgtggacattgaaagtgaaggtaaagaagtgagtttgagc
acgctggagtacattcatgtccataaaacagcaaagcttttagaggcagcagttgtctgt
ggagcaataatgggaggggcagatgctacaagcgttgaaagacttagaaaatatgctaga
tctatcgggttgttgtttcaggtggtggatgatatattggacatgaccaagtcctccgag
gagctaggaaagaccgccggcaaggatttgaccagtgacaaggctacataccctaagctg
atcggcgtagatgaggccaagaaatttgctgcccagttgactgatcaagctaatcaagaa
cttagtttctatgatcccgttaaggctgccccattgtaccatttggctagctatattgct
agtcgacaaaattaa
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