KEGG   Populus alba (white poplar): 118039704
Entry
118039704         CDS       T07314                                 
Name
(RefSeq) squalene synthase 1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
palz  Populus alba (white poplar)
Pathway
palz00100  Steroid biosynthesis
palz00909  Sesquiterpenoid and triterpenoid biosynthesis
palz01100  Metabolic pathways
palz01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:palz00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    118039704
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    118039704
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:palz01006]
    118039704
Enzymes [BR:palz01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     118039704
Prenyltransferases [BR:palz01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   118039704
SSDB
Motif
Pfam: SQS_PSY Deltameth_res
Other DBs
NCBI-GeneID: 118039704
NCBI-ProteinID: XP_034902357
LinkDB
Position
4:17313330..17318896
AA seq 413 aa
MGSLGAMLKHPVDIYPLMKLKMAAKHAERQIPPEPHWAFCYSMLHRVSRSFALVIQQLDT
ELRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDHDWHFSCGTKDYKVLMD
QFHNVSNAFLELGKGYQEAIEDITKRMGEGMAKFILKEVESIDDYDEYCYYVAGLVGLGL
SKLFHASGLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKLEGNSVKAVQCLNDMVTNALIHMDDCLKYLSELRDPAIFRFCAIPQIMAIGTLAMC
YNNVNVFRGVVKMRRGLTAQVIHQTKTMDDVYGAFFDFSCMLKSKVDNSDPNAMKTLSRL
EAAQKSCRESGALNKRKSYIIRNESKYNSVLIVLLFIILSIIFAYLSGNRSSY
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggggagtttgggagcgatgttgaaacacccagttgacatatacccattgatgaagctg
aaaatggcagctaagcatgctgaaagacagatcccacctgaacctcactgggctttctgt
tattctatgctccatagagtctctcgtagctttgctctcgttatccaacaacttgacaca
gaactccgtaacgctgtatgcatattttatttggttcttcgagcccttgacactgttgag
gatgatacaagcatacctacagatgtcaaagtgcctatcctgatagcttttcaccgccac
atatatgatcatgactggcatttctcatgtggtaccaaggactacaaggttctcatggac
cagtttcataatgtttcaaatgcttttctggagcttggaaaaggttatcaggaggcaatc
gaggatattaccaaaagaatgggtgaaggaatggcaaagtttatcttgaaggaggtggaa
agcattgatgactatgatgaatattgctactatgtagcaggacttgttggactgggcctg
tccaaactcttccatgcctctggattagaagatttggcaccagatagcctctccaattca
atgggtttgtttcttcagaaaacaaacattattcgtgattatttggaggacataaacgag
atacccaagtcacgcatgttttggcctcgcgaaatttggagcaaatatgtcaacaaactt
gaggacttgaaacttgaagggaactcggtgaaggcagtgcagtgcttgaatgatatggtt
accaatgccttgatacatatggatgattgcttgaagtacttgtctgaattgcgggaccct
gctatatttcggttttgtgctattcctcagatcatggcgattggaactctagcaatgtgc
tacaacaatgttaatgtcttcagaggtgtagtgaagatgaggcgaggtcttactgctcaa
gttattcatcaaacgaaaacaatggatgatgtctatggtgctttcttcgacttctcttgt
atgctgaagtccaaggttgacaacagtgatcctaatgcaatgaaaaccttgagcaggctg
gaagcagcacaaaaatcttgcagggaatctggggctctaaacaaaaggaaatcttacata
attaggaatgagtcaaaatataattctgttctgatcgtcctacttttcattatattgtca
attattttcgcgtatctctctggcaacagatcaagttactag

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