Populus alba (white poplar): 118039934
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Entry
118039934 CDS
T07314
Name
(RefSeq) ubiquitin receptor RAD23c isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
palz
Populus alba (white poplar)
Pathway
palz03420
Nucleotide excision repair
palz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118039934
09124 Replication and repair
03420 Nucleotide excision repair
118039934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
palz03051
]
118039934
03400 DNA repair and recombination proteins [BR:
palz03400
]
118039934
Proteasome [BR:
palz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118039934
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118039934
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_RAD5A
Crinkler
UBA_3
Ubiquitin_4
Rad60-SLD_2
TECR_N
Motif
Other DBs
NCBI-GeneID:
118039934
NCBI-ProteinID:
XP_034902657
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Position
8:complement(7929265..7934260)
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AA seq
380 aa
AA seq
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MKIFVKTLKGSTFDIEVKPEDTVADVKKNIETAQGVAVYPAEQQMLIHQAKVLKDNTTLD
ENKIVENSFVVIMLSKTKSSSSDGSTVPTAPTTKAPTTSTPASTTAPQAPTLTSAPPASA
PAPAPALVSSVAAASDYVYGQAASSLVAGNNLEVAVQQILDMGGGTWDRDTVVRALRAAY
NNPERAIEYLYSGIPEQAEVPPVAQIPIGGQAPAAQPQQHPTQTAAVPSGGPNANPLDLF
PQGLPYMGSGAGGAGTLDFLRNSQQFQALRAMVQANPQILQPTLQELGKQNPHLMRLIQE
HRDDFLRLINEPVESGEGNVLGQLAAAMPQAITVTPEEHEAIERLEAMGFDRSLVLEVFF
ACNKNEELAANYLLDHMHEF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatttgttaagaccctgaaaggcagtacttttgacatcgaagttaaacctgaa
gacacggttgctgatgtcaaaaagaatatagaaacagctcaaggggtagccgtttatcct
gctgagcagcaaatgcttattcaccaggcgaaagttcttaaagataacaccactttggat
gaaaataaaattgttgaaaatagttttgttgttatcatgttatcgaagactaagagctca
tccagtgatggttcaactgtaccaactgcccctaccactaaggcacccacaacaagtacc
ccggcatcaacaacagcacctcaagctcccacattgacctctgcaccgccagcatctgct
cctgcgcctgctcctgctctggtttcttcagttgctgctgcgtcagactatgtttatggc
caagcggcatctagtctggtcgcgggaaataacttggaggtagcagtccagcaaattctt
gacatgggtggagggacttgggatagagatactgttgttcgtgctcttcgggctgcttac
aataatccagagagagccattgaatatttatattctggtatcccagaacaagcagaagtt
ccaccagtggctcaaatccctataggtgggcaagctcctgcagcccagccccagcaacat
ccaacacaaactgctgcggttccttctggtggaccaaatgcaaatcctttagatcttttc
ccacagggccttccctacatgggttcaggtgctggtggagcaggaactcttgattttttg
cggaacagtcaacagttccaagctttgcgagctatggtgcaggctaacccgcagatactg
cagcctacgcttcaagagctgggaaaacaaaatcctcacttaatgaggcttattcaagag
caccgtgatgattttctccgcttgatcaatgaacctgttgaaagtggagaggggaatgtg
ttgggccagcttgctgcagcaatgccacaagctataacagtcactcctgaggagcacgag
gcaatagaacgtcttgaagcaatgggttttgatcgttcacttgtattggaggtattcttt
gcctgcaacaagaacgaggagctggctgccaactacctcttagatcacatgcatgagttt
tga
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