Populus alba (white poplar): 118040228
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Entry
118040228 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K13114
pinin
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118040228
03015 mRNA surveillance pathway
118040228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118040228
03041 Spliceosome [BR:
palz03041
]
118040228
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118040228
Spliceosome [BR:
palz03041
]
Complex C
Other components
EJC/TREX
118040228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
118040228
NCBI-ProteinID:
XP_034903010
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All DBs
Position
1:complement(23811671..23816528)
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AA seq
473 aa
AA seq
DB search
MGSSSAVEKTEEELQREIDELHRQQRQISERLRDPRGLRRGGFSSAAAAAPRNFASNGAR
HRGFVRPADRNEAEDQPPAKRRLLSAVVKVEEDGEIIEDPARAEDVKKQQLAEEGNVDPA
KGTLADGKPTMLRQSGWSRRDVNQRAVKRVVETPVIEPVPRVLPKNQDPSLVSRNKRMLG
QLLGTLEKFRKEDMKISGTEAFIQRSNALQRAEQKAREESERLRQQEREQIAEQRKKDLT
LRARIAAKAEEKKLELLFLRWSEHHNKLSNFISFNVFLCILHLLQVIFNFGPKXVHIHNF
IETKISFCSSAHFDYLWDLFFRTKAEPPIYYLYKKPLEKDATLLDQQREQAFLEWKAARR
EELSEYQKQIGDQHLGYVEKELERWQNARKARRANNDANLQETMDKELDTHRLEHGPKTR
KIPGGSNNEDEDDVEDINVGEDDLMDDVLVVDDNSRRVDEVAQPEPNDTSPPS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtagcagtgctgtagagaaaacggaggaagagctccaacgagagatcgatgag
ctccatcgccaacaacgccagatttcggagcgccttcgtgatcctcggggacttcgaagg
ggaggcttttcctccgccgccgctgccgcccctcgaaacttcgcttctaacggtgctcgt
catcgcggctttgttcgaccggctgataggaacgaggcagaagatcaacctcctgcaaaa
aggcgacttttatctgctgttgttaaggtggaggaggatggagagatcattgaggatcct
gccagagcagaggatgtgaagaagcagcaattggctgaggaaggaaatgttgaccctgct
aaagggactctggctgatggaaagcctaccatgttaaggcaaagtggttggtctaggaga
gatgttaatcaaagagcagtgaagagggtggttgaaactccagtgattgagcctgttcca
agggtgttacccaagaatcaggatccaagcttggttagcagaaacaaaagaatgctgggg
caacttttaggtactctggagaaattcaggaaagaagatatgaaaatttcaggcactgaa
gcatttatacaaaggtcaaatgccttgcaaagagctgaacaaaaagcacgtgaagaaagt
gaaaggctgaggcaacaagagcgtgaacaaattgctgaacagaggaagaaagatctgact
ctcagagcacgcattgctgcaaaggctgaagaaaagaagttggaattgctgtttcttcgc
tggagtgagcaccacaataaacttagcaattttataagttttaatgttttcctgtgtatt
cttcatctcctgcaggttatttttaactttggtccaaaangtgtccatattcacaatttt
attgagacgaagataagtttctgttcaagtgctcactttgattacttgtgggatctgttt
ttcaggaccaaggcagaacctccgatttattatttgtataaaaagccgttggaaaaagat
gccaccttacttgaccagcaaagagaacaggcatttttagagtggaaagctgctaggaga
gaggaattatccgaatatcagaagcagattggggatcagcatcttggttatgtggaaaag
gagttggagaggtggcaaaatgcaagaaaagcaaggagagcaaacaatgatgcgaacttg
caagaaacaatggacaaagaactggatacccacaggcttgagcatggtcccaagacaaga
aagatacctggtggaagcaacaatgaagacgaggatgacgtggaggatatcaatgtcggg
gaggatgacttgatggatgatgttctggtggttgatgataacagcaggagggttgatgag
gtagcccagccagaacccaatgataccagccccccctcctaa
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