Populus alba (white poplar): 118040450
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Entry
118040450 CDS
T07314
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
palz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118040450
03083 Polycomb repressive complex
118040450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118040450
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118040450
Histone modification proteins
HAT complexes
HATB complex
118040450
HDAC complexes
Sin3A-HDAC complex
118040450
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118040450
PRC2.2
118040450
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118040450
Heterochromatin formation proteins
Other heterochromatin formation proteins
118040450
Chromatin remodeling factors
NuRD complex
118040450
NuRF complex
118040450
NuRF complex (fruit fly)
118040450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
MIOS_WD40
DUF6922
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
118040450
NCBI-ProteinID:
XP_034903289
LinkDB
All DBs
Position
4:complement(18463209..18467681)
Genome browser
AA seq
417 aa
AA seq
DB search
MAAVEDDQEAGQDQLDEEFSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLAAPLPHPTDP
SSFSIHKLVFGTHTSDDFPNFLMVADAVLPTSVADAKIGTSCSSADSVIPKVEITQKIRV
DGEVNRARCMPQNPAIVGAKTSGCEVYVFDCTKQAERKQRDGCDPDLRLTGHDKEGYGLS
WSPFKQGYLVSGSHDNRICLWDVSANAQDKVLGALQVYEAHESVVEDVSWHLKNENLFGS
VGDDCRLVIWDTRTNQTQHSVKAHKKEINYLSFNPYNEWILATASSDATVGLFDLRKLTV
PLHALSSHTEEVFQVEWDPNHETVLASSADDRRLNIWDLNRIGEEQLELDADDGPPELLF
SHGGHKAKISDFSWNKNESWVISSVADDNTLQVWQMAESIYGDDDIVAADEPPLAEK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtggaggatgatcaagaggcgggacaagatcaacttgacgaagaattctct
gtatggaagaagaacacgccatttctctatgatctcgtcatctcccaccctctcgagtgg
ccatctctcactgtccagtgggtgcccctcgctgcaccactgcctcacccaactgatccc
tcgtctttctctattcacaagctggtttttggcactcacacttctgatgatttccccaac
tttctcatggtcgctgatgctgtgctgcccacttccgtcgctgatgccaagattggcact
agttgcagttctgcggattctgtgattcctaaggtggaaattacacagaagatacgtgtt
gatggagaggtgaacagagcacgatgtatgccacaaaatcctgctattgttggtgcaaag
acaagtggttgtgaggtttatgtgtttgattgtaccaaacaagcggagaggaaacaaagg
gacggctgtgatccggatttaaggttaactggtcatgataaagaaggttatggattgtcg
tggagtccatttaaacagggttatcttgtgagtggctcacatgataatagaatatgtttg
tgggatgtgtctgccaatgctcaagataaagtgcttggtgcattgcaagtttatgaggcc
catgaaagtgtggttgaagatgtgtcatggcacttgaagaatgaaaatttgtttggttct
gtgggggatgattgtcgattagtgatctgggacacgcgcacaaatcaaacccaacattct
gttaaagctcacaagaaagagattaactatctatcattcaatccatacaatgaatggatt
ctggccacagcttcttcagatgcaactgttggtctgtttgatttgcggaagctgactgta
ccactgcatgccttaagtagtcacacagaggaggttttccaagtagaatgggatcctaat
catgaaacagtgttggcatcctccgctgatgatagaagattgaacatctgggacctgaac
aggatcggcgaggagcagttagagttagatgctgatgacggcccaccagaacttcttttc
tctcacggaggtcacaaggcaaagatatcagatttttcatggaataaaaatgaatcatgg
gtcatctcaagtgtggctgatgacaatacccttcaagtgtggcaaatggctgaaagtatt
tatggtgacgatgacatagtggctgctgatgagcctcctctagctgaaaagtga
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