Populus alba (white poplar): 118040500
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Entry
118040500 CDS
T07314
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00900
Terpenoid backbone biosynthesis
palz01100
Metabolic pathways
palz01110
Biosynthesis of secondary metabolites
Module
palz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
118040500
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
palz01006
]
118040500
Enzymes [BR:
palz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
118040500
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
118040500
2.5.1.29 geranylgeranyl diphosphate synthase
118040500
Prenyltransferases [BR:
palz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
118040500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
118040500
NCBI-ProteinID:
XP_034903361
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All DBs
Position
4:complement(18772733..18774996)
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AA seq
347 aa
AA seq
DB search
MGVSSLIAIPSPLTTSIYLPVKSPNLYTKKLGKMSKIQCSLSVSSQSKTAQFDLKTYWTT
LIGEINQELDRAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTA
CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQTP
SDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPNAVEFVQEKKYGEMGECSAVCGG
LLAGATDDEIRRLRRYGRAVGVLYQVVDDILEAKTMKSKLDEEEKRKKGKSYVAVYGVEK
ATEVAEELRAKAKKELDGFEKYGESVVPLYSFVDYAADRGFSFGESI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggggtatcttctcttatagcaataccatcaccacttactacttctatctacctccct
gtaaaaagcccaaatctttacactaaaaaacttggcaaaatgtcaaaaattcaatgttct
ttatcggtttcaagccaatcaaagacagcccagtttgatttaaagacttattggacaacc
ttgattggagaaatcaatcaggaactagaccgagctgttcctatccagtatccagataag
atttatgaggccatgaggtattctgttcttgcaaaaggtgctaaaagagcccctccagtt
atgtgtgttgctgcttgtgaactctttggtggtaatcgcctcgccgccttccctactgct
tgtgctcttgaaatggttcatgcagcttcgttgatccatgacgaccttccctgcatggat
gatgacccatcacgacgaggtcaaccttcaaaccacacaatttatggtgttgatatggca
atccttgctggggatgcgctcttccctcttggctttagccatattgtctcccagacgcct
tctgaccttgtaccagagccacgacttctccgcgtgattgctgagattgctcgtgctgtg
gggtccacaggcatggctgccgggcagttcctagaccttgagggcggccctaatgctgtt
gaatttgttcaagagaagaaatatggtgaaatgggtgagtgctctgcagtgtgtggagga
ttgctagctggtgctacggatgatgagatacggagattgaggagatatggaagagctgtc
ggtgtattatatcaagtcgttgatgacatcttggaagcaaaaacgatgaagagcaagtta
gatgaggaggagaagagaaagaaagggaagagctatgttgctgtatacggggttgagaag
gctacagaggtggcggaggagctgagagccaaggctaaaaaggaactggatggctttgag
aaatacggcgagagtgtagtgccactctacagcttcgtggactacgctgctgatagaggt
ttcagttttggcgagtcaatttaa
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