Populus alba (white poplar): 118040669
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Entry
118040669 CDS
T07314
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118040669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118040669
Enzymes [BR:
palz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
118040669
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
118040669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
118040669
NCBI-ProteinID:
XP_034903556
LinkDB
All DBs
Position
18:complement(5761411..5767301)
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AA seq
800 aa
AA seq
DB search
MVGSQSSNGTAAKRYGITKPISVAGPTEPDLHRNAELEKFLVDSGLNESKDETIKREEVL
GLIDQIVKDWVKQLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVN
REEDFFITLHDKLAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDI
SNGSVLYEVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKLWAKRRGVYSNVTGFL
GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPRK
NPRDRFHLMPIITPAYPCMNSSYNVSTSTLRVMTEQFQSGNRICEEIELNKAQWSALFEP
YLFFEAYKNYLQVDIVAAVAADLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPNEYID
ASKQCPHYAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQEINMYMFWKPGMEIYVSHVRR
RQLPGFVFPDGYKRSRSSRHINQHTSKTGEDVARSQSGSAERPVKRKNDCEMEDLKPEKQ
ACYSPLRPQSVSPSSSVSMSGVASLASSCEGVKLGCSTIRDIGSNCKDVASNSEVRSSIG
QLESEKDGLGDAMQLGETVYQDSPLNRQISMDVHDSPIVRNELEPANHMNGIEPMEPNFE
TGEKHETGVNDEIAGLGSNLMENGSSRKLLNRVVGASQAMEVDQELVKPCCQTAVVEYAD
SVIRSHSGTQNLNCEGNVCAVDADVVLESGCLNMSRVLQKGLPEELEPKTAIGKVVNSQD
GARSESLQKPMIRLSLKSTA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctcagagttcaaacggtacggcggcgaagaggtacggaatcacgaaaccc
atatccgtcgcgggtcccactgaacctgatctccatcgaaatgccgaattagagaagttt
ttggttgactcgggcttaaacgagagcaaagatgaaactattaagagagaagaggttcta
ggccttatcgatcagattgtgaaagattgggttaagcaattgacgcgtcaaaggggatat
actgatcagatggtagaggaagccaatgctgttatctttacttttgggtcttatcgtctt
ggggtgcatggtcccggggctgacatagacacactgtgtgttgggccttcttacgtgaat
cgagaggaagatttctttatcaccttgcatgataaactggctgaaatggaagaagttact
gaacttcagccagttccagatgctcatgtcccggttatgaagtttaaattccagggaata
tcaattgatcttctttatgctagtatatcccttttggttgttccagaagacctggacatc
tccaatgggtctgtgctctatgaagttgatgagcaaactgttcgaagtctaaatgggtgc
agggttgccgatcaaattcttaaacttgttccaaatgtcgagcactttcggacaacactc
agatgtctgaagttgtgggctaaaaggcgcggtgtttattcaaatgtcactggtttcctt
ggtggagtaaactgggctcttctagttgctcgagtgtgccagctttatcctaatgcaatt
cctagtatgctggtctctcggttcttcagagtctatacacaatggcgttggccgaatcct
gtgatgctatgctcaatagaagaagatgatcttgggtttcctgtatgggatcctcgcaaa
aaccctcgggaccggtttcatcttatgccaataataactcctgcatatccttgcatgaat
tctagctataatgtgtctacaagtactcttcgtgttatgacagagcaattccaaagtggt
aacaggatatgtgaggagattgaactgaacaaggcacagtggagtgctctttttgagcct
tatcttttctttgaggcatacaaaaattacctacaagttgacatagttgcagctgttgct
gctgatttgctagcatggaaaggctgggtagagtctcggcttagacaacttaccttgaag
atagagcgggacaccaatgggatgctgcagtgccatccctatccaaatgagtatatagat
gcatccaagcaatgcccacattatgctttcttcatgggcttgcagaggaaagagggagtg
agtggtcaggagggccagcaatttgatatccggggaactgttgatgagtttaggcaagag
ataaacatgtacatgttttggaaaccagggatggaaatatatgtctctcatgttcgtaga
aggcagcttccaggctttgttttccctgatgggtacaagcgatctcgatcatcacggcat
attaaccagcacactagcaaaactggtgaagatgttgcaagatctcagtctgggtctgct
gagagacctgttaagcggaaaaatgattgtgaaatggaggatttgaagccagagaaacag
gcttgttatagcccactaagacctcagtctgtttctccttccagtagtgttagtatgtct
ggtgtggcatctctggctagttcctgtgaaggtgttaaattagggtgttcaacaattagg
gacattggcagcaactgcaaagatgttgctagcaactctgaggttaggtcatctattggg
cagttggagagtgaaaaagatggtttgggcgatgccatgcagcttggtgaaactgtgtat
caggattcgccattaaatagacagatctctatggatgtacatgattcaccaatagttagg
aatgagctagaaccagctaatcatatgaatggaatagagccaatggaaccaaattttgaa
actggggaaaaacatgagactggtgtaaatgatgaaattgcaggtttgggttcaaactta
atggagaatggatcttccagaaaactgttaaatcgggtagtgggcgctagtcaagccatg
gaggttgaccaagagcttgtcaaaccatgttgtcagacagcggttgtagaatatgctgac
agtgttataaggtcacattctggcactcagaacctcaactgcgagggtaatgtatgtgct
gtggatgcggatgtggttctggaaagtggatgtttaaacatgagccgagtgttgcaaaaa
ggcttgccagaggaattagagccgaagactgcaattgggaaagttgtaaattctcaagac
ggtgctaggtcagaatccttgcagaagccaatgataaggttgagtttgaagtcaactgca
taa
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