Populus alba (white poplar): 118040677
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Entry
118040677 CDS
T07314
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
palz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118040677
03460 Fanconi anemia pathway
118040677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118040677
03400 DNA repair and recombination proteins [BR:
palz03400
]
118040677
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118040677
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Topoisomerases
118040677
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118040677
FA (Fanconi anemia) pathway
118040677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
118040677
NCBI-ProteinID:
XP_034903572
LinkDB
All DBs
Position
14:complement(14051368..14064947)
Genome browser
AA seq
864 aa
AA seq
DB search
MAPPKVLMIAEKPSIALSIASTISGGQMHSRKGTTEVHEFEGMFNGFPAHFKVTSVTGHV
FSVDFPAKYQDWAATDPADLFQASIHKTEANPKAHICRHLSQEARGCSHLVLWLDCDREG
ENICFEVIQCTGFQAKDDRRKVYRARFSSVTEKDILKAMNCLVEPNEYEALAVDARQEID
LKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITTFKPEKFWALRP
HVMVDGYELQLEWERQKLFDLDVALMFQKLVLQDRILEVTDISEKQESKGRPPGLNTVNL
LKIASSALGFGPQLTMQLAERLYIQGFISYPRTESTAYPLSFDFKGTLGVLANNPMWGDY
VQGLLSGGYHKPQSGKDAGDHPPITPMRSANEDMLERDSWRLYQYVCQHFLGTVSPDCKY
TRKKVEFSIGGEFFHCIGLHVIVKGFTSIMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQ
TVPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGITLIRG
YQCIDPDLCLPDIRGFIEQQITLVAKGEADHSCVVQHVLEQFKRKFIYFVKQIDNMDALF
EAQFSPLADSGRAFSKCGKCLRYMKYISSQPSRLYCGTCEEVYYLPQKGTIKLYKELTCP
LDNFELLIFAMAGPEGKSFPLCPLCYNNPPFEGIDALFGASKTGGSGMLGKGAGMPCFLC
PHPTCRHSLIAQGVCACPECNGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRISTTRER
CPECDSTIIEVDFNKNTTPLEDGATLHVGCILCDDLLHSLVEVKHGKSFFKRAGKWARAR
GRGAYRGRGRGFGKMDPKMSFRDF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcccaaagtgctcatgattgcagagaaacctagcatcgctctatctattgct
tctacaatctccggcggccaaatgcatagtaggaaaggcacaaccgaggttcatgaattt
gaaggaatgtttaatggatttcctgcacactttaaagtcacttcagtcactggacatgtt
ttcagtgtagattttccagcaaaatatcaagactgggctgccactgatcctgctgatctt
tttcaagcttcaattcataagacagaagcaaatccaaaggctcatatttgtaggcattta
agtcaagaagctcgtggttgcagtcatttggtattgtggttggactgtgatcgtgaagga
gaaaatatatgctttgaagttattcagtgtaccggttttcaagcaaaggatgatagaaga
aaggtttatcgcgcacgattttcttcagttactgagaaagacattttgaaggccatgaac
tgcctagttgaacccaacgaatatgaggcactggctgtggatgctcggcaagagatagat
ttgaaagttggcgttgcattcacacgatttcaaactagttatttccagggaaaatatggc
aatcttgattccagagttatctcatatgggccgtgtcaaactcctacccttgggttttgt
gtacagaggtatttgcaaattactacttttaagccagaaaagttttgggctttgcgccct
cacgtaatggtagatggctatgaacttcaactagaatgggaacgtcaaaagttatttgac
ttggatgttgctttgatgtttcaaaagctggtattacaggatagaatattggaagtaact
gatatatcagagaaacaggaaagcaaaggccgtcctcctggtctaaacacagtgaacctt
ctaaagattgcttcaagtgcattaggcttcggacctcaactgaccatgcagctggctgaa
cgtctatatattcagggatttatcagttatccacgtacagagagcactgcctaccctttg
tcatttgattttaaaggcacacttggtgtactagcaaacaatccaatgtggggcgattat
gtccagggactgctttctggtggttatcataagcctcagtctggaaaagatgcaggtgac
catcctcctataactccaatgcggtcagcaaatgaggatatgcttgaaagagattcttgg
agactatatcagtatgtctgccaacattttctggggactgtatctccagactgcaagtat
acgaggaaaaaggtagaattctcaattggtggagagttcttccattgtataggtctgcat
gttatagtcaaaggatttacatcaattatgccatggttggcagtaagtgagaaaaatctt
cctcagtttgcaaaaggagataaaattgaagtttctaaagttgagctatttgaggggcaa
actgttcctccagattatctcagtgaaagtgagctgatttctctgatggagaagaatgga
ataggtacagatgcatcaatatctgtacatattaacaacatttgtgagcgcaactatgtt
caggtacaagctggtagaaagttggttccaactgctttgggtatcacactaataagaggc
tatcaatgtattgatccagatctctgtttaccagatattcgtggttttattgagcagcag
attacccttgttgccaagggtgaggctgatcattcttgtgttgttcagcatgtgctagaa
caattcaagcggaagttcatttactttgttaagcagattgacaacatggatgcattgttt
gaagcacagttctccccacttgccgactcaggacgtgcttttagcaaatgtggcaaatgc
ctgaggtacatgaagtacatttctagccagccatcgcgtttatattgtggtacatgtgag
gaagtttattatcttcctcagaagggaacaatcaagctgtacaaggaactaacatgccca
ttggacaactttgagctgttgatctttgccatggctggtccagaaggcaagtcattccct
ctttgtcctctctgctacaataatcctccttttgaaggtatagatgctctctttggtgcc
tctaagaccggtggttctgggatgttggggaagggggcaggcatgccatgcttcctctgt
ccgcatcctacatgtcgacattctttgatagctcaaggggtttgtgcttgccccgaatgc
aacgggacacttgttttggatcctgtaagtgctcccaagtggagactttactgcaatatg
tgcaattgtcttgtcttgctccctcaaggtgctcaccggatttccactactcgagaacga
tgtcctgaatgtgactcaacaatcatagaagtggatttcaacaagaatacgacgcccttg
gaggatggagcaaccctgcatgttggttgtattctttgcgatgatctgctccattctctc
gtcgaggtgaagcatggaaaatcgttcttcaagcgagctggtaagtgggcaagggcaagg
gggagaggtgcttatagaggaaggggacggggttttggaaaaatggaccctaagatgagc
tttcgggatttctaa
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