Populus alba (white poplar): 118040746
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Entry
118040746 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118040746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118040746
03036 Chromosome and associated proteins [BR:
palz03036
]
118040746
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118040746
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118040746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
118040746
NCBI-ProteinID:
XP_034903657
LinkDB
All DBs
Position
11:complement(21572085..21578914)
Genome browser
AA seq
1027 aa
AA seq
DB search
MFGASNPFGQSSNSPFGTTQPAFGQTSNASNNPFAPKPFGSPTSPFGAQTGSSIFGGTST
GMFGTPQTSSFSATNAFGSSTPAFGSSSTPAFGASSTPAFGASSSSAFGGSSVFGQKPFG
GFGSTAQASPFGSTNQQSQPAFGNSLFGSTPFGAPTQSAFGATSTPAFGATSTPAFGTTS
TPPPFGSTNTTQAFGATSTTPAFGSTSTAPAFGAPSSTPAFGAPSTAPAFGSTATTGFGS
TGTTFTSSPLFGTGGAFGTSTTSGFGASTTTPAFGNSTVSAFGTPTTSAFGATSSPSFTF
SSSPGFGQSASAFGSSPFGSTTSTFPAQTSPFGAQSTTSPFGNNGFAQSGFGAQRPGSRA
SPYAETAEAEGGAQAGKLLSISAMTAYKDKSHEELRWEDYQLGDKGGPLPAGQSPGGGGF
NVSASQPNPFAPPTGLGQTSANIFSSTTTNLFAPKTQTPTPSFNTTSFGPSTSSNLFQSS
TTPAFSAGSSPSLFGSTSTPSFSSTPSLFSSTVGQGTVSPFGSSMFNNTQPSLSFPSTTP
SLGQATAFSQPSPFGPSTTSSLFSSPSTGGLFSSTPSQITPNLGGFNQMTPSQPAPFQMS
QPAQNAGAFALNFSQTQAAGMSGFAGVSNNLGQLSTPQSAVAIQPVPVTNPFGTLPAMPQ
MSIGRAGTTPSVQYGISSMPVIEKPSPVRVSSLLTSWHLSQRRIRLPARKYYPKHDGPKV
PFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRASAEKASPVNASAPVHENGKN
SESDFANLSNGYTAGDKNKNLAENGVIKEQAPHVKVNQKPNGVHEDHSAQKEESYMTLSG
HRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERAKPGFCRLVKDFVVGRHG
YGSIKFSGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDK
KTGHQFTEGPKIEKYKEMLKRKAEDQGAEFVSYDPVKGEWKFKVHHFSKYMLEEEEEDRD
AQATADC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgctagcaatccttttggacaatcatcgaatagtccgtttgggacaacacag
ccggcttttggtcagaccagtaatgcaagtaacaatccttttgcgccgaagccatttggt
agtccgacatctccttttggtgcacaaacagggagttctatatttgggggcacttcaact
ggaatgtttggcacaccccaaacttcttcattctctgcaacaaatgcttttggtagctca
acgcctgcttttggatcatctagtacccctgcttttggagcgtccagtacccctgctttt
ggtgcttcgtcatcatcagcatttggtggttcttctgttttcggtcagaagccttttgga
ggctttgggtctactgctcaagcgagtccttttggaagcacaaatcagcagtcacaacca
gctttcgggaatagtttatttggttccacaccttttggtgcaccaactcagtctgccttt
ggcgctacaagtactcctgcctttggcgctacaagtactccagcctttggtacaacaagc
acaccaccaccctttggttccacaaacaccactcaagcctttggcgccacaagcaccact
ccagcctttggctccacgagcactgccccagcctttggtgccccaagctccaccccggcc
tttggtgccccaagcactgccccggcctttggctcaacggcgactactggttttggtagc
acaggaactacatttaccagttccccgttgtttgggactggtggagcttttggaacttcc
accacttcaggttttggagcttcaactaccacacctgcctttgggaactcaactgtttct
gcctttgggacaccaactacttctgctttcggggctacttcatcaccatcctttacgttt
tcatccagtccaggttttggccaatcagcttctgcttttgggagcagcccatttggaagt
actacatcaacttttccagcccagacttctccctttggagcccagagtacaacatcacca
tttgggaacaatggctttgcccagtcaggttttggggcgcaacgtcctggaagtagagca
tcaccatatgcagaaacagctgaggcagaaggtggtgcacaggctgggaaattattgtcg
atatcagccatgactgcatacaaagataaaagccatgaggagctaaggtgggaggactat
caattgggagacaaaggtggaccgcttcctgctggtcaatctcctggcgggggtggattt
aatgtctcagcctcacagccaaatccttttgctcctccaactggacttggtcaaacgtct
gcaaatatattttcttcaacaactacaaatctgtttgctccaaaaactcaaacacctaca
ccttcattcaacacaacctcctttggcccttcaacatcttccaatctctttcagtcatca
acaacacctgcattctcagctggttcatctccgtctctttttggatcaacaagtacacct
agttttagttcaacaccatccttgtttagttctactgtaggccaaggaactgtttcacca
tttggttctagtatgtttaataacacccaaccatctctctcattcccatcaaccacacct
tcactgggacaggctactgcattttcacagcccagtccatttggaccaagtaccactagt
tcattgttcagtagcccttccactggtggccttttctcaagcaccccgtctcagataact
ccaaatctgggggggtttaatcaaatgacaccatctcaaccagcaccttttcaaatgtct
cagccagctcagaatgcaggtgcttttgccttgaactttagtcagacacaagcagctggt
atgagtggctttgctggtgtatcaaacaatttgggacaattgtctaccccacaaagtgct
gttgctatacaaccagtgcctgttacaaatccatttggaacacttcctgcaatgcctcaa
atgtctattggtcgagctggaactacaccttcagttcaatatgggatttcttctatgcct
gtcattgagaaaccctctcctgttagagtatcatccttattgacttcttggcacctgtca
cagaggaggattaggttgcctgctaggaaatattaccctaagcatgatggtccaaaggtt
ccatttttcagtgatgaagaagaaacgcccagtacaccaaaggcagatgctcttttcatt
ccgagggaaaacccaagagctctggtgattcgtcctatggaccagtggccttcaagggca
agtgcagagaaagcatctccagtgaatgcatctgcaccagtacatgagaatggaaaaaat
tctgaatcagactttgccaatctctcaaatggttacactgctggtgataaaaataaaaat
ttggctgaaaatggtgtaatcaaggagcaagccccccatgtcaaagtcaaccagaaacct
aatggagtccatgaggatcattcagctcagaaagaggagtcctacatgacactcagtggt
cacagagctggcgaggctgcaattgtgtatgagcatggagcagatattgaggcactaatg
ccaaaactgcgacgttctgactattttactgagcctcgtatccaggaactggcagccaag
gagagggctaaaccaggtttctgccgccttgttaaggattttgtggttggaaggcatggc
tatggaagcatcaagttctctggtgaaacagatgttcgacggcttgatcttgagtccctt
gttcagtttaataaccgggaggttattgtgtacatggatgatagcaagaaaccacctgtt
ggacaaggtctcaacaagcccgctgaggtcacacttctcaacataaaatgctttgacaaa
aagactggacatcagttcacagaaggaccaaaaatagagaaatacaaggagatgctcaaa
aggaaggccgaagaccaaggcgctgaatttgtttcatatgaccctgttaaaggagagtgg
aagttcaaggtccaccatttcagcaagtacatgctggaggaggaagaagaggatcgggat
gcgcaagctaccgcagattgttga
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integrated database retrieval system
