Populus alba (white poplar): 118040772
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Entry
118040772 CDS
T07314
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118040772
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118040772
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118040772
Membrane trafficking [BR:
palz04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
118040772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
COG2_C
Motif
Other DBs
NCBI-GeneID:
118040772
NCBI-ProteinID:
XP_034903688
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All DBs
Position
11:22041617..22052290
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AA seq
1027 aa
AA seq
DB search
MDSLPSFNSNSNSPLKKSLSDTTNIQNLSSILNNPHSFKSTDPSAWLGWWSSSATLAPPD
FSPILPKQPPPDISRSDFLPYLSAVSDTYSRFEDIKNHTKNNDLDQESKSDLADAESNSD
LAAVGQGEALVACLREVPALYFKEDFALEDGPTFHAACPFSNAAANLMLQEKLSQYLDVV
ELHLVKEISLRSNSFFEAQGQLEDLNGKIVEGCERIRELKETIRVLDKDLVESAREIHDL
NVSRGDLVSLQNKLRLILYVNQALSTLKLLVASADCAGALDVTDDLQQFLDGDELTGLHC
FRHLRDHVAAAIESINSILSAEFMRASIHGAGDKDLLLLSKAKARDSIYMNGIDEEQVKL
DDEEMSNFRDRLLPLIVGLLRTAKLPPVLRIYRDTLTASMKTTIKNAVAELLPTFSAQSL
ESDLTPAERTADTDGGGLSLASKLRSLSSENFVLLLSAIFNIVQAHLVRAAEVKKAIEWI
MCSVDGHYAADSVAAAIAVGAAAAETAHESDGLGGSLLPFSPQRSISKFASSQLKANDAA
SPSNISRNFRADVLRENAEAVFAACDAAHGRWAKLLGVRALLHPKLRLVEFLSIYNITQD
FITATEKIGGRLGYSIRGTMQSQAKAFVDFQHEMRMTKIRAVLDQEMWVEVDVPDEFQAM
VASLFYSESVGLNDTQGDATTRYGEVGTGNDGSLVIDAEAQNAEQELVQMNSTDISLENS
VQKKSTPSTEATESNKVIAATSSAQSNNHNVKERGKSTSQTLSCGGVGYHMVNCGLILLK
MLSEYMDMNNFLPTLSSEVVHRVVEILKFFNTRTCQLILGAGAMQVSGLKSITSKHLALA
SQVIGFVYAIIPEIRRVLFLKVPEARKVLLLSEIDRVAQDYKVHQEEILTKLVQIMRERL
LHHLRSLPQIVESWNRPVDTDSQPSPFALTLVKEVTYLQRILSRTLHEADIQAIFRQVVT
IFHKEISEAFSRMEISSQQAKFRLHRDITLILGCIRSLPSGNLSESGTLNWGQLDEFLVQ
RFGSEAG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggattctctcccatccttcaattccaattccaattcccctctcaaaaaatcactatct
gataccacaaatatccaaaacctctcctccatcctcaacaaccctcactccttcaaatcc
accgatccctccgcctggctcggctggtggtcctcctccgccactctagctcctcctgat
ttctcccccatactccccaaacaaccgccacctgatatttcccgatcggatttcctcccc
tacttatctgctgtctccgacacctactcccgcttcgaagacatcaaaaaccacactaaa
aataacgaccttgatcaagaatcgaagtcggatttggcggatgcggagtccaattcggat
ttggctgctgtagggcaaggagaggcgctggttgcgtgtttgagggaagttccggcactg
tattttaaagaggattttgcgttggaagacgggcccacctttcatgccgcgtgtccgttt
agcaatgcggcggcgaatttgatgttgcaggagaagttgagtcagtatttggatgtggtg
gagttgcatttggtgaaggagatatcgttgcggtcgaattcgtttttcgaagcgcaaggg
cagttggaggatttgaatgggaagattgtggaagggtgtgagaggatcagggagttgaag
gagactatcagggttttggataaggatttggtggagtcggcgagggagattcatgacctg
aatgttagtagaggggatttggtttctttgcagaataagttgaggcttattttgtatgtt
aatcaggctctctccacgcttaaattgcttgttgcatctgcagattgtgccggagcattg
gatgttactgatgatttgcagcagttcttggatggagatgagctgactggtctacattgt
tttcgtcaccttcgggatcatgtggcagctgcaatagagtccataaacagcatcctttca
gcagaatttatgcgagcttcaatacatggtgctggggataaagatttgcttcttttatcc
aaagcaaaagccagggattccatatatatgaatggaatagatgaagaacaggttaagttg
gatgatgaagagatgtccaattttcgagatcgtcttcttcctctcattgttgggttactc
agaactgccaagctcccccctgtgttgagaatataccgagatacccttacagccagtatg
aaaaccaccattaagaatgcagttgcagagctgcttcctaccttttcagcccaatctctg
gagtcagatctcacacctgcagaacgaacagcagatacagatggtggaggtttatcactt
gcaagcaagttaaggagcttgtcatccgaaaattttgtgctacttttaagtgctattttc
aacattgtacaggcacacttagtgcgggctgctgaagtgaaaaaggcaattgagtggatt
atgtgtagcgttgatggacactatgctgctgattcagttgctgctgcaattgcagttggt
gcagcagctgctgaaacagctcatgagagtgatggtctaggtggttctcttctccccttt
tctccacagagaagtatttccaagtttgcttcatctcagctgaaagcaaatgatgcagca
agtccctcaaatatttcaagaaattttagagccgatgtattgagagagaatgcagaagct
gtctttgctgcttgtgatgctgctcatggaagatgggcaaagctccttggtgtccgtgct
cttcttcatccaaagttgagattggtggagtttttaagcatatacaacatcacccaagat
tttataactgccactgaaaagattggtggaaggttgggttatagtattcgtggaacaatg
caatcacaggctaaagcttttgttgatttccagcatgaaatgcgaatgacaaaaattagg
gcagtgcttgatcaggagatgtgggtggaagtagatgtccctgatgaatttcaggccatg
gttgcttcattgttttattctgaatctgtgggcctaaatgacactcaaggtgatgcgaca
accagatatggtgaagtgggcacaggcaatgatggttcacttgtgattgatgctgaagca
caaaatgctgaacaagaacttgtgcaaatgaactctacagatatatctttggaaaattcc
gtgcaaaagaaatctactccctcaacagaggcaactgaaagcaataaagtcatagctgca
acttcatcagctcagagtaacaatcataatgtgaaggagcgtggaaaatctacttcccaa
acactttcttgtggaggtgttggttatcacatggtaaactgtggcttaatattgctgaag
atgttgtcagaatacatggatatgaataattttttgccaacactatcttcagaagttgtt
catcgtgtcgtggagatcttaaaattcttcaatacaaggacttgccaacttattcttgga
gctggtgccatgcaggtgtcgggtctgaagtctattacgtcaaagcacttggcccttgct
agtcaagtcatcggttttgtatatgccattattcctgaaatcaggcgagttcttttcctt
aaagtacccgaagcacggaaagtattactgttgtcagagattgatcgagttgcacaggat
tacaaggttcatcaagaggagatacttacaaagctggttcagataatgagggaaaggttg
ttgcatcatctacgtagtctgcctcaaattgttgagagctggaatagacctgtagatacc
gattcacagcctagtccttttgctctaacgcttgtaaaggaggttacctatcttcaacgt
atcttatctagaactttacatgaagcagatatccaagcaattttcaggcaagtggttaca
atctttcataaagaaatttcagaagcattttcacggatggagatcagcagtcagcaagca
aagttcaggcttcatcgggatattacacttatccttggatgcatcagatcattaccttct
ggtaacttgagtgaatcgggtaccctgaattggggacaacttgatgaatttttggttcaa
agattcgggtctgaagctggctga
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