Populus alba (white poplar): 118040923
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Entry
118040923 CDS
T07314
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118040923
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118040923
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118040923
03036 Chromosome and associated proteins [BR:
palz03036
]
118040923
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118040923
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118040923
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118040923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
118040923
NCBI-ProteinID:
XP_034903890
LinkDB
All DBs
Position
1:complement(22076006..22086405)
Genome browser
AA seq
512 aa
AA seq
DB search
MNGGDEVAEAPASPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDRSGDHLATGDRGG
RVVLFERTDTKDHGGSRRDLERMGYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPSKAVGNGGVASSSNSSIGK
QYLANGGDKSHNLPSNDLSISPGGFPSLRLPVVTSNETSLMARCRRVYAHAHDYHINSIS
NNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPSHCNMLAY
SSSKGSIRLIDMRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFARDGRHILSRD
YMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCSSGDGLRVATGSYSN
LFRVFGCAPGSTEASTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAEGPGVDANGSS
FDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgaagtcgctgaagctccggcaagtccaccacagcctctagagtgg
aaattctctcaggtattcggtgaacgaacagccggtgaagaagtacaagaagttgatatt
atttcagctattgaatttgatagatctggtgatcatcttgctactggtgaccgtggaggc
cgcgtggttctctttgagaggactgacactaaggatcatggcggatccagaagggatctg
gagaggatgggttacccaattagtaggcaccccgagtttcgttataaaacagaatttcag
agccatgaacctgagtttgactatctcaagagcttagaaatagaggagaaaatcaacaaa
atcagatggtgccaaacagccaatggtgctctctttctcctatctaccaatgataaaacc
atcaagtattggaaggtccaagaaaagaaggtgaagaaaatttctgagatgaatgtggac
ccttcaaaagctgtaggaaatggtggcgttgccagttcaagtaattcaagtattggtaaa
caatatcttgcaaatggaggagacaagtcacacaatttaccaagcaatgacttgagcatt
tcacctgggggttttccatcattgcgtttacctgtggtgactagcaacgagacaagcttg
atggctagatgtcgaagggtgtatgcccatgcgcatgactatcatattaattcaatttca
aacaacagtgatggtgaaacttttatatcagctgatgacctccgaataaatctttggaat
ttggaaatcagcaaccaaagtttcaatatcgttgatgtcaaacctgcaaatatggaggat
ttaactgaggttataacatcagcagaattccaccccagccattgcaatatgttagcatac
agcagttcaaaaggctcaatccgactcattgatatgcgacaatcagctttgtgcgactct
catgccaaattgtttgaggaaccagaggcaccaggctccagatcattttttacagaaata
attgcctcaatctctgatattaaatttgcaagggatggaagacatatacttagtcgtgat
tacatgactcttaagctgtgggatatcaatatggattcaggtccagttgcaaccttccag
gttcatgaatatttaagaccaaagttgtgtgatttatatgaaaacgattccatctttgat
aaattcgagtgttgctcgagtggtgatggattgcgagttgcaacaggctcctacagcaat
ctgttccgagtgtttggttgtgccccgggaagtactgaggcatcaactttagaagccagc
aaaaatccaatgaggagacaagtccagaccccttcgaggccttcaagatccctaagcagc
ataacacgagttgtaagacggggagcagaaggcccaggagttgatgcaaatggaagttct
tttgatttcaccacgaagttgcttcacctagcatggcatccaactgaaaattccattgcc
tgcgctgctgcaaacagcttatacatgtactatgcgtaa
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