Populus alba (white poplar): 118041174
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Entry
118041174 CDS
T07314
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
palz
Populus alba (white poplar)
Pathway
palz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
118041174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118041174
Transcription factors [BR:
palz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
118041174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
118041174
NCBI-ProteinID:
XP_034904262
LinkDB
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Position
14:8295339..8302763
Genome browser
AA seq
764 aa
AA seq
DB search
MEIFSSGEDLVIKTRKPYTITKQRERWTEEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAVVKGIPRGQALDIDIPPPRPKRKPSNPYPRKIGVGPPASQVGAK
DGKLLTSASFPHCKQVLGLEKEPLPEKLNEDERPTNAKENQDDNCSEVFSLLQEPHCSSV
PSVNKNSVPTLEILKKTSPFREFVSSPKEGNHDASNQSFVTVELGANQKLDNSDVKQDNS
TSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQNYPRHVPVHVLDGSLGTCMQA
PPSDFSFQESMFHPIGEIPARPNLYSHPAASKTTDHPNISPGSSMHQSFPSFPPPFTPTH
HNQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFASTFWPYGNVESSADSPACAQGGF
QSRQLNSAPSMAAIAAATVAAATAWWTAHGLLPMCAPLHTSFACPPASATAIQSADTGQV
SATKTERKETAENPSLQGQIQDPEHNEALQAQNLASKSPKITSSDSEESGGPKLNTGPEV
IDHELTTTPHEVQDSSQTKSRKLIDRSSCGSNTASSSEIETDALEKAEKGTEEPKEDDAN
HPASESSSRRSRSSSSMNDSWKEVSEEGRLAFQALFAREVLPQSFSPLHDLKSKMHQNED
TGEKKDAEEKDGDASLTNLNSKTWECCSGNQEGEKNALSRCENYGEEGLLTIGLGHGKLK
VRRTGFKPYKRCSLEAKESRTGTGSCQGEEKGPKRLRLEGEASV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattctcttccggggaagacttggttattaagacaaggaaaccatatacaatt
accaagcaacgagaaagatggacagaggaggagcatagcaggttcctagaggccttgaag
ctctatggacgagcttggcagcgaattgaagaacatattggtacaaagactgccgttcag
atcagaagtcatgcacagaagttcttttcaaagttggagaaggaggctgttgttaaaggt
attccaagaggacaagcacttgacatagacattccaccaccacgtcccaaaaggaaacca
agcaatccttatcctcgaaagataggtgtaggtcctcccgcatcacaggtgggagcaaag
gatggaaagcttttaacttcagcttcttttccgcattgtaagcaagttttaggtttggag
aaagaaccacttcctgagaaacttaatgaagatgagaggccaaccaatgctaaggaaaat
caggatgacaattgctcagaagtattttcccttctccaagaacctcactgttcgtctgta
ccttcagtcaacaagaattctgtaccaacactagagattctcaaaaagactagccctttc
agggagttcgtatcttcaccgaaggagggaaatcatgatgcaagtaatcaatcctttgtc
accgtcgagcttggagcaaatcaaaagttggacaactctgatgtcaaacaggataacagc
actagtgagttttcaaaatcagaaaacttttgctctttttctgagaaattgtttcagcaa
aagaaatcagatgattttattggagcattgcgaacagatgggatgcaagccatgcagaac
tatccaaggcatgtccctgtgcacgttctagatgggagcctgggaacatgtatgcaagct
cctccctcagatttttcgtttcaggaatccatgtttcatccaataggagaaattccagca
cgtcctaatttatattcacatcctgctgcatccaaaaccactgatcatccaaatatttca
ccgggatcctctatgcatcaatcatttccaagttttcctcctccctttaccccaactcat
cataatcaagatgactacagatctttcctccacatatcctccgctttttcaagcctcatt
gtatctactctgctacaaaacccagcagcccatgctgcagcaagctttgcatctaccttt
tggccctatggaaatgtggagagttctgcggattctccggcatgtgcccaaggaggtttc
caatccagacaattgaactctgctcctagtatggcagctattgctgctgctacagtggca
gcagcaaccgcatggtggacagcacatggactacttcccatgtgtgctcctcttcatacc
tcttttgcctgccctcctgcatctgcaactgcaattcagtctgcggatactggtcaagtt
tctgcaaccaaaacagaaaggaaggaaacagctgaaaatccttctttgcagggacaaata
caggacccagagcacaatgaagctttgcaagctcaaaacttagcatctaaatcaccaaag
ataacatcatcagactctgaagagagtggaggcccaaagctaaatactggaccagaagtt
attgatcatgagttgactacaacacctcacgaggtccaggattcaagccaaacaaagagc
agaaaactgattgaccgctcttcatgtggttcaaacacagcttctagcagtgaaatagag
acagatgcattagagaaggctgagaaaggcacggaagagccaaaagaagatgatgcaaat
catccagcttccgagtctagctctcgccgcagcagaagcagtagcagcatgaatgattca
tggaaagaggtctccgaagaggggcggctggcatttcaagcactcttcgctagagaggta
ttgccccagagcttctcacctctacatgatctgaagagtaagatgcaccagaatgaagat
actggagaaaagaaagatgcagaggagaaagatggagatgcatcactgacaaatctcaac
agtaaaacgtgggagtgctgctctggtaatcaagaaggggagaaaaatgctttgtctaga
tgtgaaaactatggggaggaggggctgctgacgattgggcttggacatggaaagcttaag
gttcgtcgaaccggatttaaaccttacaaaaggtgttcactggaggccaaagaaagcagg
acaggaaccggcagctgccagggcgaggagaaaggccccaagaggttacgtttggaagga
gaagcttcagtttga
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