Populus alba (white poplar): 118041187
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Entry
118041187 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
palz
Populus alba (white poplar)
Pathway
palz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118041187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118041187
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118041187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Clathrin
TPR_VPS8_2
Beta-prop_EML_2
WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
MinC_N
zf_RING_Vps8
zf-RING_Vps41
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
118041187
NCBI-ProteinID:
XP_034904297
LinkDB
All DBs
Position
14:8215838..8227509
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AA seq
1930 aa
AA seq
DB search
MTKKLTSTKLPMELDLDSFLNSHSTSDSDTDNTSVPHRTLDEILNDSDSSSPPSSPPSIK
QSDLPPSHLQHAVSLDSSTQSQILQDQLKPTSLTRITNSPWRLPPPSSRQLPSLFGGVRS
NSKPGAALAAAAAASRSVPTPHAAAIKSRRLSSGSGTFQTILDIAESGSSGGGDQEIVSN
SSNGDSIERFQSQSEEKMGGLFQSATAENAIPNTEEDLKISRESEGEPVFRIEGEVRLSD
DSGQDMLHNTGSTSNSDAYLNLDDENAASVSKDKFVEVSDSSEVDIINLNNVDSFKDEAV
KGGGNNLEENMDEVKDDGVGVFTIGDGDDASSMSDISELVEERIEQLESEMISKRAEKKR
KPSLKPLELAEELEKKMAYTGLHWEEGAAAQPMRLEGVRRGSTTLGYFDVDSHNVITQTV
GSQTFRRDHGSPQVLAVHLNYIAVGMSKGVIVVVPSRYSSHNDDNMDAKMLMLGLQGDRS
HAPVTSMCFNQQGDMLLAGYGDGHITVWDVQRASAAKVITGEHTAPVVHAFFLGQDSQVT
RQFKAVTGDSKGLVLLHAFSVVPLLNRFSFKTQCLLDGQRTGTVLSASPLLLDESCGGAL
PATQGNSSASSTSISSMMGGVVGGDAGWKLFNEGSSLVEEGVVIFVTHQTALVVRLSPSL
QVYAQLSRPDGVREGSMPYTAWKCTTQSHSSSPDNVPEHVAERVSLLAIAWDRKVQVAKL
VKSELKVYGKWSLDSSAIGVAWLDDHMLVVLTLTGQLYLFAKDGTVIHQTSFAVDGSGGD
DLAAYHTHLINIYGNPEKAYHNCIGVRGASVYILGPTHLIVSRLLPWKERIQVLRRAGDW
MGALNMAMTLYDGQAHGVVDLPKSVDAVKEAIMPYLVELLMSYVDEVFSYISVAFCNQIG
KVEQQDDSKTGSNSVHSEIKEQFTRVGGVAVEFCVHIQRTDILFDEIFSKFVSVQHRDTF
LELLEPYILRDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCRE
HGLYGALVYLFNKGLDDFRTPLEELLVVSRTSQQETAAALGYRMLVYLKYCFLGLAFPPG
HGALPVARLSSLRTELVQFLLESSDASNPQAVSRGSYLNLYHLLQLDTEATLDVLRCAFL
DGENLKPEFSMQDGAETSMEAKQENNIMAESQNFWIQNTINALVQITEKHISRADESAVD
NVDTRFVDAWPSKKDLGNLFEFIAYHVACRKAHVSKGVLSQILEYLTSESTVPPGVPAHI
IETSKEREKQVLALLEVVPENDWNESYVLQLCEKAHFHQVCGLIHTIRHQYLAALDSYMK
DVDEPIHTFAYINNMLVKLSDNDSGAFRSAVISRIPELLVLSREGTFFLVIDHFSAESPH
ILSELRSHPQSLFLYLKTVIEVHLSGTLDFSNLKKADDIDVADGRRVKDQSKGLTAYLER
ISDFPKFMRNNPVHVNDDMIELYFELLCQFERNSVLRFLGTFDNYRVEHCLRKCQEYGII
DAAAFLLERVGDAGSALLLTLSGLNDNFSELESAVGSVVSDMSVSASSDHYSTVLKIKEV
DNIRSILNACIGLCQRNTPRLQPDESEMLWFRLLDSFCVPLMDSYSDRRASKAKNSGGVL
GEVLGSQEDDGAWVIKWKISRSCKGAHTLRKLFSMFIKEIVEGMIGYIHLPTIMSKLLSD
NGSQEFGDFKITILGMLGTYGFERRILDTAKSLIEDDTFYTMSLLKKGASHGYAPRSTVC
CICNCPLAKNSSFRIRVFSCGHATHLDCEIENESSSRGHLSGCPVCMPKKNTQSGARNKS
ALPENGLVNKVSVRPRRAHGTSILHPHEDLLENSYGLQQISRFEILSSLQKDKKLVQIES
MPQLRLSPPAVYHEKVKKGPGLLTGESSSALAEVEKPGKSRQLRELKLKGSSLRFPLKSS
IFGKEKTNKG
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaactaacgagtaccaaactccctatggaactcgaccttgactccttcctt
aattctcattccacctccgattctgacaccgataacacctccgtccctcaccgtactctc
gacgaaattctcaacgactccgattcctcttcccctccttcatccccaccctccatcaaa
caatcagatctccctccctcccacctccaacacgccgtctcactagattcctccacacaa
tcacaaattctccaggatcaattaaaacccacttcacttactcgaattaccaattcaccg
tggcgccttcctcctccgtcttctagacagttgccatcgcttttcggtggagtgagatcg
aattcgaagccaggggcagcccttgcagcggcagctgctgcctctcgttctgttccgaca
ccgcatgccgccgcgatcaagtccaggagattgagcagcgggagtggaaccttccagacg
atcctcgatatagcagaatcaggctccagtggtggcggcgatcaagaaattgtgtcaaat
tcatcgaacggagactcaattgaaagattccagtcccagtcagaggagaagatgggtgga
ttatttcaatctgctacagcagagaatgcgattccgaatacagaagaggatttgaagatt
tcacgtgaaagtgaaggagagccagtttttcgaatcgagggggaagtacggcttagtgat
gatagtggtcaagatatgttgcataatactggttcgacctcgaattctgatgcttactta
aatttggatgatgaaaatgcagcttctgtttctaaagataaatttgtggaagtgagtgat
tcgagtgaagtagatattattaacttgaataatgttgattcctttaaagacgaggcggtg
aaaggagggggaaataatttggaagaaaatatggacgaggttaaagatgatggggtaggt
gtttttactattggcgatggtgatgatgcaagttcaatgagtgatatttcggagcttgta
gaggagagaatcgagcaactggagagtgagatgattagtaaaagggcggagaagaaacgg
aagcctagtctgaagccgcttgaattggcagaagaactcgagaagaaaatggcctatact
ggattgcattgggaggagggtgcggctgctcagcctatgagacttgagggtgttcggagg
gggtcaactactttaggatattttgatgttgattctcataatgttattacacaaactgtt
ggttcacaaacatttaggagagatcatggttcacctcaagttttggctgttcatcttaac
tacattgcagtgggaatgtcaaaaggtgtcattgttgttgtccctagtagatactcttct
cacaatgatgataacatggatgcaaagatgctaatgcttggtttgcaaggtgatcgatct
catgccccagtgacttccatgtgctttaatcagcaaggagacatgctcttggctggttac
ggagatggtcacattactgtttgggatgtccagagggcatcagcagcaaaagttattact
ggggagcatactgcaccagttgtgcatgcattctttctgggccaggattctcaagttact
cgtcagtttaaagcagttactggtgatagcaagggtctggttctgctacatgctttctca
gtggttcccttgcttaacaggttctcgttcaaaacacagtgtcttcttgatggacaaaga
acgggcactgtgttatcagcttcaccccttcttcttgatgaatcttgtggaggtgctttg
ccagccacacagggaaattcttcagcatcatccaccagcataagtagcatgatgggtggt
gtagttgggggagatgcaggttggaaactattcaatgagggctcttctttggttgaagaa
ggtgtggtcatatttgtcactcatcaaactgctttggtggttaggctcagtcccagttta
caggtatatgcacaactttctaggccagatggagttcgagagggttccatgccttacact
gcatggaaatgtaccacacaatcacacagttcatcacctgacaatgttccagaacatgtg
gcagagagagtctcattgctcgcaattgcctgggatcgaaaagtgcaagtggcaaaattg
gtcaaatctgagttaaaagtttatggaaaatggtcccttgacagttcagccataggtgtg
gcttggttggatgatcatatgcttgtggttctcacgttaacaggacaactatatttgttc
gcaaaggatggcactgtgattcaccaaactagttttgctgttgatggttctgggggagat
gatctagctgcatatcatacacacttgatcaatatctatgggaaccctgagaaagcttat
cacaattgtataggtgtaaggggagcttctgtgtacatacttggaccaacacatcttatt
gtttcccgccttctcccatggaaagagcgtattcaggttctgcgaagagcaggtgactgg
atgggtgccttgaacatggcaatgacactttatgatggccaagctcatggtgttgttgac
cttcctaaatcagtagatgctgtaaaggaagccataatgccatatctggtagagttgctt
atgtcatatgtagatgaagtattttcttatatctcagtggctttttgcaatcaaattgga
aaagtggaacaacaagatgactcaaagactggaagcaactcggtgcactctgaaataaaa
gaacagttcacacgtgtcggtggtgttgctgtagaattctgtgtccatatacagcggact
gacatcctttttgatgaaattttctctaaatttgtctctgttcaacatagagatacattt
ttggagcttttggagccatatatattgagggatatgctggggtctctaccccctgagatt
atgcaagccctggtagagcattacagtagcaaagggtggttgcagcgagttgagcaatgt
gtccttcacatggacatttcctccttggattttaatcaggttgtcaggctatgccgggag
catgggttatatggtgccttggtgtatcttttcaataaaggattggatgatttcaggaca
cctttagaggagctattggttgtttcaagaactagtcaacaagagactgctgctgccctt
gggtacaggatgcttgtttatctgaagtactgctttttaggtctcgcctttccaccaggg
catggggctcttcctgtcgcacgtttgtcatctcttaggaccgaacttgtgcagtttttg
ctggagagttccgatgcctctaatccacaggcagtgtcaagaggatcatacctgaacttg
tatcatctcttacagttagatactgaagcaactttagatgttttgaggtgtgctttttta
gatggtgaaaatctgaaacctgagttctctatgcaagatggtgccgaaacaagtatggag
gctaagcaagaaaacaatattatggctgaaagtcagaatttttggattcagaataccata
aatgctcttgttcaaattaccgaaaaacacatatcccgagcagatgagtctgctgttgat
aatgttgatactcgatttgtggatgcatggccctcaaagaaagatttaggaaatctgttt
gaattcattgcataccatgttgcatgtaggaaagctcatgtttcaaaaggtgtgctgagt
caaattttggagtacttgacatcagagagtactgtcccaccaggtgttcctgcacacatc
attgaaacttcaaaggagagagagaaacaggtgcttgcacttctggaagtggtgcctgag
aatgattggaatgagtcttatgtgttacagctatgtgagaaagcacactttcaccaggtt
tgtggcttaattcataccatcagacatcagtatcttgctgccttggatagctatatgaaa
gacgtagatgaacccattcatacttttgcctacattaacaatatgttagtgaagctgagt
gacaatgatagtggtgcttttcgatcagctgtgatttctaggattcctgagttgcttgtc
ttaagcagagagggaacattcttcttggtcattgaccattttagtgctgaaagtccacat
atcctctctgaattacgctctcatccacagagtctttttctgtatttaaagactgtcatc
gaggttcatttgtctggaaccttagacttttctaatttaaaaaaagctgatgatatagat
gttgctgatggaagaagggtgaaagatcagtcaaaaggactcacagcttatctggaaagg
atctctgattttcctaagttcatgcggaataatcctgttcatgtgaatgatgatatgatt
gagctttattttgagctattatgtcagtttgagcgcaattcagttctcagattcttgggc
acttttgataactatcgggtggaacattgtttacgcaagtgccaggaatatgggataata
gacgctgctgcctttttgttggaaagggttggtgacgctggaagtgctcttttactcaca
ctttctggtctcaatgataatttttcagagctagagtcagctgtgggaagtgtggtttca
gatatgagtgtttctgccagtagtgatcattacagcactgttttaaaaattaaagaggtg
gacaacatacgcagtatattaaatgcctgtattggattatgccagcggaacacccctcgt
ttacaacctgacgaatctgagatgctctggttcagattacttgactcgttttgtgtgcct
ttgatggattcctattctgatagaagggcatcaaaagcaaagaattctggtggagtgcta
ggtgaagttctgggctcccaagaggatgatggggcatgggtaatcaagtggaaaatctcc
agatcttgcaaaggtgctcacaccttgaggaaattgttttctatgttcatcaaagagatt
gtcgaggggatgattggatacattcaccttccaactatcatgtcaaaactcctctctgat
aatggtagccaggaatttggtgatttcaaaattacaatattggggatgcttggaacatat
ggctttgaaagaagaattctggatactgccaaatccttgatagaggatgacacgttctat
accatgagcttactaaagaagggggcatctcatggctatgctccccgaagtactgtatgt
tgtatatgcaactgcccacttgcaaagaattccagtttccgtattcgagttttcagttgt
ggtcatgcaactcatcttgattgcgaaattgaaaatgagtcatcaagtaggggccactta
tctggatgtcctgtttgcatgcccaagaagaatactcaaagtggggctagaaacaaatca
gcacttccagagaatggtttagtgaataaggtttctgtgagaccacggagagcacatgga
actagcattttacacccacatgaagatttgttagagaattcctatgggcttcagcaaata
tcacggtttgagatcttgtctagtctccaaaaagataagaaattagtacagatagaaagc
atgcctcagctgaggctttcaccacctgctgtttatcatgaaaaggtgaagaaaggacct
ggtcttttaacaggagagagtagcagtgctcttgcagaagtcgagaaaccaggcaaaagc
aggcaactcagagagctaaaactgaaagggtcatctctccggttcccactaaaatcaagc
atattcggcaaggagaagacgaacaaaggctga
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