KEGG   Populus alba (white poplar): 118041445
Entry
118041445         CDS       T07314                                 
Name
(RefSeq) DNA mismatch repair protein PMS1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
palz  Populus alba (white poplar)
Pathway
palz03430  Mismatch repair
palz03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    118041445
   03460 Fanconi anemia pathway
    118041445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:palz03400]
    118041445
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     118041445
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c Fn3_VIN3
Other DBs
NCBI-GeneID: 118041445
NCBI-ProteinID: XP_034904678
LinkDB
Position
14:complement(9943172..9950023)
AA seq 915 aa
MESSAITIRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQ
VIDNGCGVSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTK
NESVATHLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISL
LNAYALISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDIS
DSCKVEGFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSRQYPIAIMN
FTIPTTACDVNVTPDKRKIFFSDEVSILLALREGLEMIYSSSNSCYSVNKFENHAKAADS
SQLCSPREKSNMLSKQSSANGNDSEETQTDAEDSSPLMTVEVKSKPFQVGERSIHDIEEK
FMMKDFALRLHGIKKTDNLTNSNSCKATTHLNTVPDQNAQCLSRVVERVKGDSNGPSGSF
QSKLSNFLTVNKRKREDITTQLSEVPVLRNQTSECQLKKSDIDMHDAVTSLPFNHHHIDD
STEFVDAEPPKHHSTDVIINKTRNNSGLQPKLGEDPLGEKNSSSPDDVPSITSPCKGLGN
LLEDLPVASPPTQSSIEILDVPVPFSAQQICSTLHFSFQDLHSRRMQRLSRLQSGNFTFG
GTKRSHRSYAAATLELSQPDNEERKLRALAAATTELERLFRKEDFGRMKVIGQFNLGFII
GKLDQDLFIVDQHAADEKYNFERLCQSTILNQQPLLRPLRLELSPEEEVVASMNLDIIRK
NGFALEEDPHALPGHHFKLKAVPFSKNITFGVEDVKDLISTLSDSQGECSIISRYKMDTA
DSVCPSRVHAMFASRACRSSIMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMRHLID
MSSIYERPDETEASL
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggaatcttccgctatcactatcaggcctataaacaaagccgctgtccacagaatctgc
gctggtcaagtgatcttggacctctcatccgcagtcaaggagcttgttgaaaacagcttg
gatgctggcgctacttccatcgaaatctctttgaaagactacggtctggaatccttccag
gtcattgataatggctgcggcgtctctcctaataatttcaaggttctggcacttaagcac
cacacgtccaaattgggggactttcatgatcttcagtctttgaccacatttggtttcaga
ggagaggcattgagttcgctttgcgtgttaggagacctcaccgttgaaacaaggaccaaa
aacgagtcggtggctacacacttgacttttaatcattcaggtttgttaacagccgagaga
aagacagcccgacaggttggtacgacagtcactgttaagaagttgttttccagtttgccg
gtgcgaagcaaagaatttagccgcaacattcgcaaggaatacggaaagcttatttcttta
ttgaatgcctatgctcttatttcaaaaggcgttcgcatagtctgctctaacacaactggt
aaaaatgcaaagtctgtagtactaaaaacccaaggaagtgattcccttaaagataacatc
ataacagtgtttggtgtgaacaccttcagctgcttagagcctgtggatatagatatatca
gacagttgcaaggttgaaggcttcctttctaagtctggtcaaggcagtggtcgcaatttg
ggtgatagacaatactattttgtaaatggtcgaccagtggacatgcctaaagtcagcaag
cttgtgaatgaactatacaaaggtgcaaactcccgacaatatcccattgcaatcatgaat
ttcaccattccaactacagcgtgtgatgttaatgtaactcctgacaaaagaaaaatattc
ttttctgatgaggtttctatactgcttgctctaagggagggactggaaatgatttattct
tcaagtaattcctgttattctgttaataaatttgagaatcatgctaaggcagcagatagc
tctcagctgtgctctcctcgtgagaaatctaatatgttatcaaaacaatcatctgcaaat
ggcaatgacagtgaagaaactcaaacagatgcagaggacagcagtccactcatgacagtt
gaagtcaaatctaagccctttcaagttggagaaagatctatccatgacatcgaagaaaag
tttatgatgaaggactttgctcttagattacatggcattaagaaaactgataatcttaca
aacagtaacagctgcaaagcaacgacacatctcaatactgtgccggatcaaaatgcacaa
tgcctgtcaagagtggttgagcgagtaaagggggattcaaatggtccttctggctccttt
caatcaaaactcagcaattttttaactgtcaataagagaaagcgtgaagacattactaca
caattgtctgaagttcctgttctaagaaatcagacctctgaatgtcaattgaagaaaagt
gatattgacatgcatgatgcggttacaagccttccttttaatcatcaccacattgatgac
tctactgagtttgttgatgctgagccccccaaacatcacagcacagacgtgatcatcaat
aaaacaaggaataattcaggattgcagcctaaacttggggaggatccattaggtgagaaa
aattcatcttctcctgatgatgtcccatcaattacttccccttgcaaagggcttggaaat
ttgttagaggatcttcctgttgcctctcctccaactcaatcttccatcgaaatattagat
gttccagtgcctttttctgcccaacagatatgctccaccttgcactttagctttcaagac
ctgcattcaagaaggatgcagaggttgtcaaggttgcaatctggcaatttcacgtttgga
ggcacaaagagaagtcataggagctatgctgctgctacactggagctctcccaaccagac
aatgaggagcggaaattaagggctttagctgctgctacaactgagttagaaagactattc
agaaaagaagactttggtagaatgaaggtgattggtcaatttaatcttggttttatcatt
gggaaattagatcaggatttgtttatcgtggatcagcatgctgctgatgagaagtataat
tttgagagactctgtcaatcaacgattttaaaccagcagcccttgcttcggccactgagg
ctggagttatctccagaagaggaagtagttgcttcaatgaacctagacataatcagaaaa
aatggatttgctttggaagaggatccacatgcactacctgggcatcattttaaattgaaa
gctgttccttttagtaagaacataacttttggagttgaagatgtgaaggatctgatttct
actctatctgatagtcaaggggaatgctccataatcagtagatacaaaatggacactgct
gattccgtctgcccatcaagagttcatgcaatgttcgcatcacgtgcatgcagatcatcg
attatgattggagatgcactagggaggaatgaaatgcagaagatacttgagcatttggtc
gatctgaagtccccctggaattgcccccacggcagaccaaccatgcgccatttgattgac
atgtcatccatttacgaaaggccagatgaaacggaagcgagcttgtga

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