Populus alba (white poplar): 118041492
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Entry
118041492 CDS
T07314
Name
(RefSeq) cyclin-dependent kinase D-2
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
palz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118041492
09124 Replication and repair
03420 Nucleotide excision repair
118041492
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
palz01001
]
118041492
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118041492
03019 Messenger RNA biogenesis [BR:
palz03019
]
118041492
03400 DNA repair and recombination proteins [BR:
palz03400
]
118041492
Enzymes [BR:
palz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
118041492
2.7.11.23 [RNA-polymerase]-subunit kinase
118041492
Protein kinases [BR:
palz01001
]
Serine/threonine kinases: CMGC group
CDK family
118041492
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118041492
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
118041492
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118041492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Seadorna_VP7
RTC
Motif
Other DBs
NCBI-GeneID:
118041492
NCBI-ProteinID:
XP_034904744
LinkDB
All DBs
Position
14:complement(6222773..6229551)
Genome browser
AA seq
416 aa
AA seq
DB search
MSENDVEKKVADRYLKREILGEGTYGVVYKAIDTETGKTVAIKKIRLGRQKEGVNFTALR
EIKLLKELKDPNIIELIHAFPHKGNLHLVFEFMETDLEAVIRDPNIFLSPGDIKSYFQMT
LKGLAVCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAP
ELLFGAKQYGASVDVWAAGCIFAELLNRRPFLQGDSDIDQLGKIFQKLGTPTPLQWPDLE
WLPDFVEYSSQIIQPWRKLCPTASDDALDLLSKMFTYDPRARISVQQALEHRYFTSIPLP
TDPAKLPRPAPKRESHNPRTSDLHDRPVVLSPKRKARRVMSDCEGFDGNSFQVDKVDERG
GEIRQAAGDNTGRNEPKLMSVDFSVFGSKPMSRPTINSADRSHLKRKLDLEFQHPE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaatgatgtggagaagaaagtagcggatagatatctaaagcgagagattctt
ggtgaaggtacttatggtgttgtctacaaagccattgatactgagactgggaagactgtt
gcaatcaagaaaattaggctcggaagacaaaaggaaggagtaaattttacagcacttaga
gagatcaaacttcttaaagagcttaaagacccgaatataatcgagttgatccatgccttc
cctcacaaagggaacttgcatcttgtgtttgagttcatggagactgatcttgaagcggtg
attcgcgatcccaatatatttctttcgccaggggatataaaatcatactttcagatgacg
ttgaaaggactagctgtttgccataagaaatgggttttgcatagggatatgaagccaaat
aacttgttgataggatctaatgggcagctcaagcttgcagattttggtttagcacgtatt
tttggaagtcctggtcgcaagttcacacaccaagtctttgctcgatggtatagagcacct
gaacttttgtttggtgccaaacaatatggtgctagtgttgatgtatgggctgctggttgt
atatttgcagagctacttaatcgcagaccattcctacagggggatagcgatatcgatcaa
ctaggaaagatctttcagaagttggggactccaactcctttgcagtggcctgatttggaa
tggcttcctgattttgtagaatattcatctcagattatacaaccttggcgaaaactgtgt
ccaacggctagtgacgacgctttagatctgttatctaagatgtttacatatgatccaaga
gctagaatttcagtgcaacaggcattggaacacaggtatttcacctccatacctctgccc
acagatccagcaaagctccctagaccagctcccaagagagaatcacacaatcctaggact
tcagatttacatgatcgtcctgttgtcttgtcaccaaaaaggaaggcaagaagagtgatg
tcagattgtgaagggtttgatggaaattcattccaagttgataaggttgatgaacgtggc
ggtgagattagacaggcagctggggataacacaggcaggaatgaaccgaagctgatgtca
gtagatttttctgtctttggatcaaaaccaatgagcagacctacgattaacagtgctgac
agatctcatctaaagaggaaactggatcttgagttccagcatcctgaataa
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