Populus alba (white poplar): 118041511
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Entry
118041511 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118041511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118041511
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118041511
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118041511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
118041511
NCBI-ProteinID:
XP_034904776
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All DBs
Position
14:complement(7654732..7657889)
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AA seq
331 aa
AA seq
DB search
MELDSIECVPSLDLTDEGEIHHHHHLHHFPSVSKPHSTTTTTTNNNNNNNTNTVASSFHS
TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA
ESLELPCKYMSLGCPEIFPYYSKLKHENLCNFRPYNCPYAGSECVIVGDIPFLVTHLRDD
HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR
FMGDETEARNYSYSLEVGGNGRKLIWEGMPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG
DRKELKLRVTGRIWKEQQNPEGGACIPNLCS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcattgaatgtgtgccatccttagatttaacagacgagggtgagatc
caccaccaccaccatctccaccatttcccttctgtttcaaagccacacagcaccaccacc
accaccaccaataataataacaataacaatactaatactgtggcttcttcttttcactct
actagtgttcatgagctccttgaatgccctgtttgtaccaattctatgtaccctcctatt
catcagtgccacaatggccatacactctgttcaacctgtaaaacacgagtacacaatcgg
tgtcccacttgtagacaggagcttggtgacattagatgtctagctttggaaaaagtagct
gaatcactcgagctaccttgcaagtacatgtcacttggatgcccagagatttttccatac
tacagtaaactaaaacatgagaacttgtgcaattttaggccatacaactgtccatatgct
ggatcagagtgtgttattgttggggatatcccattccttgttactcatctgagggatgat
cacaaagtggacatgcattctgggtgtactttcaaccatcgctatgtcaagtctaatcct
cgtgaagtagaaaatgcaacatggatgttaacagttttccactgttttggccagtatttc
tgccttcattttgaagctttccagcttgggatggctcctgtttatatggcattcctcaga
ttcatgggtgatgagacagaagctcggaattacagctacagcctggaggttgggggaaat
ggtcggaaacttatttgggaaggcatgccacggagtataagagatagccacaggaaggtt
agggacagccatgatggacttattatacaacgtaacatggcacttttcttctctggagga
gacaggaaggagttaaagctgcgtgttacagggcggatatggaaagaacagcagaaccca
gaaggtggggcatgcattcccaacctttgtagttag
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