Populus alba (white poplar): 118041593
Help
Entry
118041593 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118041593
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118041593
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118041593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf-UDP
zf-RING_16
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
118041593
NCBI-ProteinID:
XP_034904913
LinkDB
All DBs
Position
14:complement(6985485..6989453)
Genome browser
AA seq
536 aa
AA seq
DB search
MVTSPNNSFAKTICSICYEDLKPIIEDLQSISICGHVFHELCLQQWFEYCSNEKKRSCPV
CKQNCSAQNAGRLYFQSVGDQTEPFGDRKAGECEEDPKLLRGEVKRLEGKLSGLNTILES
QVKEMKHLNEELYLCKDELKKEVKLRTHAMEQKASIQHLLRSKSEELDALKLERIRLQDR
NMALAKELVALKLVSDVNLEEDEVLKLASFGNEANNKDTLDILKKSLVIRNKTYKELMAK
CNQLGQGEARSCKRLGKAKEKINKLKTRVKELEMVVEVKDNESLRALKASKKANCKGLVA
EDIKDNSNALSTSTSCAGQKEQHCVSVDLTGSLTSDREKNSFICDKGANSSKECTRITAH
NKQGNAYYARDEAVLNLPTAVHVILDPDSKHQTREGESAIAKSEAVSDIHSEAKVHKTVN
PSGPFGIRINNGDICFSSGLMGPDGTNRYLGRWCKRGQSNGSVAMQGTSASSRDLIAVGS
DGRGGRVKVLRSMNQSLLDGKENSVSAKKCKFGAKTSSLQSQGCLQIEHFFGRASQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggtcacaagccctaacaactctttcgcgaagacaatctgctccatctgctatgaagat
ctcaagcccattatcgaagatctccaatcaatctccatttgtggccacgtctttcacgaa
ctctgcctgcagcagtggtttgaatattgttcgaatgaaaagaagcgtagctgtccagtt
tgcaagcagaattgctcggcgcaaaatgccggtcgcctttattttcagtcggtcggggac
caaaccgaaccgttcggggatcggaaggcgggggagtgtgaggaggatcccaagttgctg
cgtggagaagtgaagagattggaaggaaaattgtcgggtctcaatacgatcttggagagt
caagtgaaggaaatgaagcatctcaatgaggaattgtatctttgtaaagatgagttgaag
aaagaagttaaattgaggactcatgcaatggaacaaaaagcatcgattcagcacctgctt
cgatcgaaatctgaggagcttgatgcactgaagttggagcgcatcaggctgcaagatagg
aatatggcacttgccaaagagcttgtagcacttaagctggtatcggatgtgaatctggag
gaagatgaggttttaaagcttgcctcttttggtaatgaagccaataacaaagatacccta
gacatcctgaaaaagtctttggtcattcgcaataagacttacaaagaattgatggctaag
tgtaaccaacttggacagggtgaggctcgttcttgtaaaagacttgggaaggccaaagaa
aagatcaataaattaaagacaagggtcaaagaactagagatggttgttgaagtaaaagat
aatgaaagtttgagggctttaaaagcttcaaagaaggcaaattgcaaagggcttgttgca
gaagatattaaggacaattctaatgctttgtccacaagtacttcatgtgctggtcaaaag
gaacagcattgtgtatctgtggatctaacaggaagcttgaccagtgatcgagaaaaaaat
agtttcatttgtgataagggtgccaattcatccaaagaatgtactagaatcactgctcat
aacaaacagggaaatgcttattatgcaagagacgaagcagttttgaatcttcctacagct
gtgcatgtaattctagaccctgattcaaaacatcagaccagagagggtgaatctgctatt
gcaaagtcagaagcagtttctgatattcacagtgaagccaaagtgcacaaaacagtgaac
ccatctggaccttttggcataagaatcaataatggggatatatgtttctctagtggattg
atgggtcctgatggaacaaaccggtacttggggagatggtgtaagcgtggtcaaagcaac
ggatcagtggccatgcaaggtacaagtgcaagtagcagggatttaattgctgttggatct
gatgggcgaggtggtagagttaaagtgctgagatctatgaatcaatccttgttggatggc
aaagaaaattctgtatctgccaagaagtgcaagtttggagctaaaacaagcagtttgcaa
tctcaaggctgtttacagatagaacacttctttgggagggccagtcagtaa
DBGET
integrated database retrieval system
