Populus alba (white poplar): 118041629
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Entry
118041629 CDS
T07314
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118041629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118041629
03036 Chromosome and associated proteins [BR:
palz03036
]
118041629
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118041629
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
118041629
Chromatin remodeling factors
BAF complex
118041629
PBAF complex
118041629
GBAF(ncBAF) complex
118041629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
118041629
NCBI-ProteinID:
XP_034904970
LinkDB
All DBs
Position
14:6704399..6716679
Genome browser
AA seq
2272 aa
AA seq
DB search
MQSGGGGGGGPSWVGPAGRAGSTSSAAASPSSSSSSAAVWNLQLGFDSVQQQQQQQQSRQ
ALQQQLLRKPEGNETLLAYQAGTLQGVTGGNNFASSPGSMQIPQQSRQLFDLARQHGSSQ
DGQNRNQGVEQQALNPIQQAYLQYAFQAAQQKSALAMQSQQQAKIGTLGSPAGKDHDMRV
GNLKMQELMSMQLANQAQASSSKNPSEHFSRGEKQVEQGQQQASEQRNEQKSPIQPTAIG
QLMPANVTRPMQAPQVQQNIQNMANNQLAMAAQMQAMQAWALERNIDLAQPANANLMAKL
IPVMQARMAAQLKANENNTGGQSSHLPVSKPQVASPSIANESSPHANSSSDVSGQSGSAK
TRQTVPSGPFGSTSNGGMVSNPNNLTMQQQAFHSRENQAPPRQAVVLGNGMPANASQGAD
HTLPSKNALNSPETSQTQQFRHLNRSSPQSAGPSNDGGLGNHISSQGRPAVQMAQERTGF
TKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQLQQQLLPAGGSNLDRSGGK
IAEDQARHLESNDKGSKAMLSMNGQNFSKEEVFTGDEKATVSTMHMQKAPAVMKEPTPLV
ASGKEEQQTATCSVNSDQETEHGLLKTPVRSDLAADRGKGVASQFPASDAMQAKKPAQAS
TVVQPKDTGSARKYHGPLFDFPFFTRKHDSVGSTGMINTNNNLTLAYDVKDLLFEEGMEM
LNKKRSENLKKINGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDDVDQQQQEI
MAMPDRLYRKFVRLCERQRMELTRQVQASQKAIREKQLKSIMQWRKKLLETHWAIRDART
ARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSISGDASERYA
VLSSFLTQTEEYLHKLGGKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRAAAACAGEE
VLIRNRFVEMNAPRDSSSVNKYYNLAHAVNERVIRQPSMLRVGTLRDYQLVGLQWMLSLY
NNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLPSV
SCIYYVGGKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKD
RESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQK
EAPMHDGEDDWLETEKKVIIIHRLHQILEPFMLRRRVQDVEGSLPPKVSIVLRCRMSSIQ
STIYDWIKSTGTIRVDPEDEKLRAQKNPAYQPKVYKTLNNRCMELRKTCNHPLLNYPYFN
DLSKDFLVQSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDG
TTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVA
RAHRIGQTREVKVIYMEAVVDKISSCQKEDELRSGGTVDLEDDLVGKDRYMGSIESLIRN
NIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETMHDVPSLQEVNRMIA
RSKDEVELFDQMDEEFDWTEEMTRYDQVPKWLRASSKEVDATMAILSKKPSKAILFADVM
GMVSGEMETERKRVRPKGKKSPNYKEIDDENGDYSEASSDERNGYSVHEEEGEIQEIEDD
ESSGAVGAPPINKDQSEDDGPPCDGGYECHGALESTRNNDVLDEAGSSGSSSDSQRVTRI
ISPVSPQKFGSLSALDARPGSLPKKLPDELEEGEIAVSGDSHMDHQQSGSWMHDRDEGED
EQVLQPKIKRKRSIRLRPRHTVERPEEKSSNDVQRGDSCLLPFQMDHKYQAQLRSDTEMK
ALVEPSGFKYDQIDSSTSRRNLPSRRIAKTPKLHASPKSGRLHLQSAPAEDATEHSRVSL
DGKVPSTSGTSSLGTKMSDVIQRRCKNVIGKFQRRIDKEGQQIVPLLADLWKRIENSGHV
SGAGTNLLDLRKIEQRVDRLEYSGVMELVFDVQFMLKGAMQFYGFSHEVRTEARKVHDLF
FDILKIAFPDTDFREARNALSFSGPSSTSVTALSAKQAALGLSKRNKSINNVEPDNSTTH
KPMQRGSIPNSDDIRSVRVPQKETRVGSGSGSSREQYHQDDSPLHPGELVICKKKRKDRD
KSAVRSRTGSSGPVSPPSMGRNITSPVLNSIPKDARLNTSPVLNSIPKDARQNTSPILNS
IPKDARLSHQNKHQQGWVNQPQPPNGGAGSVGWANPVKRLRTDAGKRRPSHL
NT seq
6819 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggtggtggaggaggtgggcccagttgggtaggaccggctgggcgtgcg
gggtccacatcatcagctgcagcatcgccttcgtcttcgtcttcgtctgctgctgtatgg
aaccttcagttgggatttgattcggtacagcagcaacagcaacaacagcagtctaggcag
gcattacagcaacaattacttagaaaacccgaagggaatgaaacccttctagcttatcaa
gctggaactcttcaaggagttacgggagggaacaattttgcttcttctccaggctcaatg
caaatacctcaacagtccaggcaattatttgatttggctcgacaacatggttcctctcag
gacggacagaataggaatcaaggtgttgagcaacaggctttgaacccaattcaacaagca
tatcttcaatatgctttccaggccgcccaacaaaagtcagctttggcaatgcagtctcag
caacaagctaaaataggaacactgggctctcctgctggaaaggatcatgacatgcgggtg
ggaaatttgaaaatgcaggaactcatgtccatgcagttggcaaatcaggctcaggcttca
tcttctaagaacccatctgaacatttttctcgtggtgaaaaacaggtggaacaaggtcag
cagcaagcctctgaacagaggaatgagcaaaagtctccaatccagcctactgccattgga
caactaatgcctgcaaatgttactagacccatgcaggcaccacaggttcagcaaaacatc
caaaacatggcaaacaaccagctcgcaatggctgctcagatgcaagcaatgcaagcatgg
gcacttgagcgcaacattgatctggcacaacctgcaaatgccaacttgatggcgaagctt
attccagtcatgcaggcaaggatggctgcacaactaaaggcaaatgaaaataatactggt
ggacaatcatcacatctccctgtgtcaaagccacaggttgcttctccatccattgcaaac
gagagttctcctcatgcaaattcatccagtgatgtctctgggcagtctggctcagcaaaa
accaggcaaactgtaccatctggtccctttggctcaacttccaatggaggcatggtgagt
aaccctaacaacctcacaatgcagcagcaggcttttcacagcagagagaaccaagcacct
cctcgacaggcagttgtgcttggaaatggaatgcctgcaaacgcaagccaaggtgcagat
catactctgccttcaaaaaatgcattaaacagcccagaaacttcacagacacagcaattc
aggcacctgaatcgatcttctccacaatctgctggtccttctaatgatggaggcttgggc
aaccacatctcttcacaaggcaggccagctgtccagatggcacaagagcgcactgggttc
actaaacagcagttgcatgttctgaaggcccaaattctagcatttaggcgactgaagaaa
ggagaaggtactcttccacaagagcttcttcgagctattgctccaccaccccttgagttg
cagctgcagcaacaacttctccctgcaggaggaagtaatctggacaggtcgggtggaaag
attgctgaagaccaagccagacatctggagtccaatgacaagggttcgaaagcaatgcta
tctatgaatggacagaatttttctaaagaggaagtttttactggcgatgagaaagcaacc
gtctcaaccatgcatatgcaaaaggcaccggctgtgatgaaggaacccactccccttgtg
gcttctgggaaagaagagcagcaaactgctacatgttctgtcaattcagaccaggagact
gaacatggacttctgaaaactcctgttagaagtgatctagcagcagataggggaaagggc
gttgcttcacagtttcctgcatctgatgctatgcaagctaagaaacctgcacaagcaagc
actgtggtccagccgaaagataccggctctgccagaaagtatcatggaccattatttgat
tttcccttttttactaggaaacatgactctgttgggtcaactgggatgattaacacaaat
aataacctaacattggcctatgacgtcaaagatcttctttttgaggaaggcatggaaatg
cttaacaagaaaaggtcagagaatttgaagaaaatcaatggtctactagcagtaaattta
gagaggaaaaggattagaccagatcttgtgttgcggttacagattgaagagaaaaagctt
aggcttttggatctacaggcgcgtttaagggatgacgttgatcaacagcaacaggaaatc
atggcaatgcctgacagactatatcggaagtttgttcggctatgtgagcgtcaacggatg
gagctgacaaggcaggtacaggcctctcaaaaagccataagagagaagcaattgaaatcc
atcatgcagtggcgcaagaaacttcttgagactcattgggccatccgggatgcacgtact
gcccgtaacagaggagttgctaaataccatgagagaatgttgagggagttttcaaagaga
aaggatgatgaccgaaataaaaggatggaggcattgaagaacaatgatgttgaaaggtat
agagaaatgttgttggagcaacagactagcatctcaggcgatgcttctgagagatatgct
gttctctcgtcattcttgactcagacagaagaatatctccataagctgggaggtaaaata
acagctgctaagaatcagcaggaagtggaggaggcagctaatgccgcagcagcagctgca
cgactgcagggcctatcagaagaagaagtacgagcagctgcagcttgtgctggtgaggaa
gtattgataagaaaccggtttgtggaaatgaatgcacccagggacagttcatctgttaac
aaatattacaatcttgcacatgctgtgaatgaaagggtcataaggcaaccatctatgtta
cgagttggaaccttacgagactatcagcttgttgggttgcagtggatgctttctttgtat
aacaacaaattaaatggaatcttggcagatgagatggggcttggaaagactgtacaggtg
atggcattgattgcttatctaatggaattcaaaggaaactatggaccacatcttataatc
gttcctaatgctgttttggtgaattggaagagcgagctacacaactggctgccatctgta
tcctgcatttattatgttggtggaaaggatcagcggtcaaaattattttcccaagaggtt
tctgccatgaaatttaatgtccttgtgacaacttatgagttcatcatgtatgaccggtca
aaactttctaaagttgattggaagtacatcataattgacgaggcacagagaatgaaggac
agggagtcagttttagcccgtgatcttgatagatatcgctgccagaggcgcttacttctc
acggggacaccattacagaatgacttgaaggagctatggtcgctcttgaatctacttctg
ccagaagtttttgataatcgtaaagcatttcatgattggttctcaaagcccttccaaaag
gaagctccaatgcatgatggagaggatgactggcttgaaactgaaaagaaggtgatcata
attcatcgacttcatcaaattctagagccttttatgctcagacgtcgtgttcaagacgtg
gaaggttcacttccacccaaggtttccattgtcttgaggtgtagaatgtcttctatacag
agtacaatttatgattggatcaaatctactggtactattcgagttgaccctgaggatgag
aagctcagggctcaaaaaaatccagcataccagcctaaggtgtacaaaactttaaataac
agatgtatggagctccgaaaaacttgcaatcatcctttgcttaattacccatatttcaat
gacttatccaaggattttcttgttcaatcttgtgggaaactatggattctggataggatt
ctcataaaacttcaaagaacaggccatcgggtgctactctttagtaccatgacaaaactc
cttgatatattggaggaatacctgcaatggcgtcgactggtatacagaaggattgatgga
acaactagccttgaagatcgtgaatcggctatcgtggactttaatagccatgattcagac
tgctttattttcttgcttagtattcgtgctgctggaaggggtcttaatcttcagtcagct
gacacggttatcatatatgatcctgatccaaaccctaagaatgaggaacaggcagttgct
agagcccaccggattggacagacaagagaagtcaaagtcatttatatggaagcagttgtt
gacaaaatttctagctgtcaaaaagaggatgaattaagaagtggaggcaccgttgattta
gaagatgaccttgttggtaaggatcgatatatgggttctattgagagcctaataaggaat
aacatccagcaatataagattgacatggctgatgaggttatcaatgctgggcgttttgat
caaagaacaacacatgaggagaggcgaatgactttagagacattattgcatgatgaggag
cggtatcaagaaactatgcatgatgttccatcactccaagaggttaatcgcatgatagcc
aggagtaaagatgaagttgaattatttgatcaaatggatgaagagtttgattggactgag
gagatgacgaggtatgatcaggtacctaaatggcttagagccagttcaaaagaagtggat
gctactatggctattctatcaaagaaaccatcaaaagctatcctttttgctgatgttatg
ggtatggtttccggtgaaatggaaactgaaagaaaacgggtgcggccaaaggggaaaaag
tctcctaattacaaggaaatcgatgatgaaaatggagactattctgaggcaagttctgat
gagagaaacggttattctgtacatgaagaagagggagaaattcaagagattgaagatgat
gaatccagtggtgctgttggggcaccacccattaataaggaccaatcagaagatgatggt
cccccgtgtgatggtgggtatgagtgtcacggagctttggaaagcactagaaataatgat
gtactagatgaagctggttcctcaggatcatcctctgacagccaaagagttacacgaatc
atctctcctgtctctcctcagaaattcgggtcactttctgcattagatgctagaccaggt
tcacttcccaaaaagctgccagatgaattagaagagggggaaattgccgtgtctggagat
tctcacatggatcaccagcaatctggaagttggatgcatgatcgcgatgaaggtgaagat
gaacaggttctgcaacctaagattaaacgaaaacgtagtattcggcttcgaccccgtcac
actgttgaaaggccagaggagaagtctagcaatgatgtgcaacgtggagattcttgtttg
ttgccattccaaatggatcataaatatcaagcacagttgaggagcgatactgaaatgaaa
gcattagtagagcctagtggattcaagtatgatcagattgattcctcaacaagtaggcga
aatttaccttcaagaagaatagccaaaacacctaagttacatgcttcgccaaaatctggc
agattgcatttgcagtctgctccagcagaggatgctactgaacactccagagtgagtctg
gatggtaaagttccaagtacaagtggtacttcatctttgggcaccaagatgtctgatgtc
atccagagaaggtgtaagaatgttattggcaagttccaaaggaggatagacaaggaagga
caacaaattgtacctcttctagctgatttgtggaagaggattgaaaattctggtcatgta
agtggtgctggaactaatcttttggatttacggaagattgaacagcgtgttgacagattg
gagtatagtggagtgatggagcttgtgtttgacgtgcaattcatgttaaagggtgcaatg
caattttatgggttctcacatgaggttagaactgaagcaagaaaggtgcatgatctcttt
tttgatatcttgaagattgcatttccagacaccgatttccgagaggccaggaatgctcta
tctttctctggcccatcatcaacttccgttactgctctgtctgcaaaacaagctgctctt
ggcctaagcaagagaaacaagtcaataaataatgtggaacctgacaacagcactacccat
aagccaatgcagcgaggatccattcctaatagtgacgacattaggagcgtccgtgtgccc
cagaaggaaacaagggttgggagtggaagtggcagtagtagggaacaatatcatcaggat
gattctccactgcatccaggggagttggttatctgcaagaagaagaggaaagaccgggac
aagtcagcagtgaggtcaaggactggatcaagtggtccagtctccccccctagcatgggc
cgtaatatcacgagtcctgttttgaattcaatacctaaagatgcgagactgaatacgagt
cctgttttgaattcaatacctaaagatgcgagacagaatacgagtcctattttgaattca
atacctaaagatgcgagactgagccatcagaataagcatcagcaagggtgggtgaaccaa
ccacaaccaccaaatggtggtgcggggagtgttggttgggcaaatcctgtaaagaggttg
aggacagatgctggtaaaagaaggccgagccatttatga
DBGET
integrated database retrieval system
