Populus alba (white poplar): 118041709
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Entry
118041709 CDS
T07314
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118041709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118041709
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118041709
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_14
Motif
Other DBs
NCBI-GeneID:
118041709
NCBI-ProteinID:
XP_034905073
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Position
14:complement(10209595..10211654)
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AA seq
323 aa
AA seq
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MPLVKLANLLRGAPQLVELGTAAAAEPNGLLLNLRYANIQGADLIKLVSQCPSLQRLWVL
DCIEDIGLEALAACCKDLTELRVFPSNPYGAEPNVSLTERGLVSVSDGCPKLQSVLYFCR
QMTNAALVTIAKNRPSMTCFRLCIIEPRAPDYQTLQPLDLGFGGIVENNKDLRRLSLSGL
LTDRVFEYIGTYTKKLEMLSVAFAGDSDLGLHHVLSGREKLCKLEIRDCPFGDKALLANA
AKLETMRSLWMSSCSVSFRACKLLGQKMPRLNVEVIDERGPPDLRPESCPVEKLYIYRTI
AGPRFDMPGFVWTMDEDSVLRFS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccccttgtcaagcttgccaatcttcttcgtggtgcaccgcaactggttgaattgggc
acagccgcagccgcagagccaaacgggctcttactcaacttgaggtatgctaatatacaa
ggtgctgatctcattaagcttgtcagtcaatgcccaagtttgcagcgcttatgggtgctg
gattgtattgaagacattggactcgaagctcttgcagcatgttgcaaggacctgacagag
ttgagggtgtttccatctaacccatatggtgcggaaccaaatgtatccttgacagaaagg
ggccttgtctctgtctctgacggctgtcccaagcttcagtcagttctgtacttttgccgt
caaatgactaatgctgccctggttacaatagcaaagaaccggccaagtatgacttgcttt
cgtctttgtattattgaaccacgggctcctgattatcaaacactccagcctctggatttg
ggttttggaggcattgttgaaaacaacaaggatctccggcgtctttccctctcaggtcta
ttgactgatcgcgtgtttgagtacattggaacttacaccaaaaagttggagatgctatct
gtggcatttgctggggatagtgatctgggactccaccatgtgttgtctgggcgtgaaaag
ctttgcaaactagagataagggattgtccctttggtgacaaagctcttttggcgaatgct
gcaaagctggagacaatgcgatccctttggatgtcttcttgctctgtgagtttcagagca
tgtaagctgctgggtcagaagatgcctagactcaatgttgaagttattgatgagagggga
cctccagacttgaggccggaaagctgccctgttgagaagctttatatatacagaaccatt
gcagggcctaggtttgacatgcctggatttgtttggacaatggatgaagattctgtgtta
aggttttcttga
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