Populus alba (white poplar): 118042033
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Entry
118042033 CDS
T07314
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118042033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118042033
03036 Chromosome and associated proteins [BR:
palz03036
]
118042033
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118042033
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118042033
PBAF complex
118042033
GBAF(ncBAF) complex
118042033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
118042033
NCBI-ProteinID:
XP_034905457
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Position
2:336649..339677
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AA seq
500 aa
AA seq
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MASVSPAPPSLHPKIPLSSPVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFS
WDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDV
GSIRRVFDFLDAWGLINYSPLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASNN
KDNCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEARTD
WTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDSK
YNQIKECDDDESGPNGNGSPSPSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAARA
AVTTLTEVEYGGSKGSLEYVSRVTKHLDSGVASNGDTNLNASVKACLDANSLLEKEESDV
ETAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVLSKRSLTTKI
DERGSTLKAEERGDENAKTD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagtatcacccgcaccaccatctctccaccccaaaatccctctatcctctccc
gtcaaacctgagattcaacctcccacaaccgccgccccttctccccgaccaccacaacca
cctcctccctcctccgaaccagacgtcgtccacatccctagctactcccgctggttttca
tgggacaacatacacgaatgcgaggtccgattcctcccagaattcttcgattcgcgatcg
ccttcgaaaaaccctagtgtttacaagtactacaggaactcaatcatctcccaattcagg
aaaaacccttccgccaaactcacttttactgaaatcaggaagactctcgttggtgacgtg
gggtccattcgtagggtttttgatttcttggatgcttggggtttgatcaattactcccct
ttgaataagcaattgaagtgggaagatggcaaggattcttcttccaagactgctgcttcg
cccgccggtggtggtggtggtgatggagggactgccggtgatgctaatgctagtaataat
aaggacaattgtaagagattgtgcagtggctgtaagtctctctgtagcattgcttgcttc
ttttgcgataagtatgatataactctttgtgcccggtgctatgtgcgtggaaactatcgg
gttggtgtcagttcatcggatttcaggcgggtggagataagtgaagaggcaaggacagat
tggacagagaaagagactttgcaacttcttgaagctgttatgcattacagggatgactgg
aagaaggttgcgcaacatgttggtggtagaagtgagaaggactgcattactcattttatc
aagcttccttttggagaggtttttactgattatacagacgtaggggatgttgacagcaag
tataaccaaataaaggaatgtgatgatgatgaatctggaccaaatggtaatggttctcca
tccccaagtaaaaaaatacgtctctcacctcttgtggatgcaagcaacccaataatggct
caggctgcttttttatcagctttggcgggcacagaggttgcagaagctgcggctcgagca
gctgtaactactctgactgaggtggaatatgggggaagtaaaggcagtcttgaatatgtt
tctagggttacaaagcacctagattctggtgttgcatcaaatggtgacaccaatctaaac
gcttcagtaaaagcttgtttggatgcgaattcacttctggagaaggaagagtcggatgtg
gagacagcaatttccaggattacagaagttcagatgaaagagattcaagataagattctt
cggtttgaggagttggatttgcagatggagaaagagtggcagcagctggaccaaatgaag
aaccttctctttgctgaccagctcagcgttttatctaaaagaagtttaacaacaaaaatc
gacgaacgtggttcaacactgaaagcagaggaacgaggggatgaaaatgcaaaaactgat
tga
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