Populus alba (white poplar): 118042160
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Entry
118042160 CDS
T07314
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
palz03015
mRNA surveillance pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118042160
09122 Translation
03013 Nucleocytoplasmic transport
118042160
03015 mRNA surveillance pathway
118042160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118042160
03041 Spliceosome [BR:
palz03041
]
118042160
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118042160
Spliceosome [BR:
palz03041
]
Complex C
Other components
EJC/TREX
118042160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
118042160
NCBI-ProteinID:
XP_034905646
LinkDB
All DBs
Position
2:6822080..6824063
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AA seq
152 aa
AA seq
DB search
MAAKEGDNGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP
AVLKECRRIISDSEIMKEDDNNWPEPDRVGKQELEIVMGNEHISFTTSKIGSLVDVHSSQ
DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaggagggagataacggagagttctaccttcgttactacgtaggtcacaga
ggtaaattcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatac
gccaacaactctaactacaaaaacgacaccatgattcgcaaagaagtcttccttaccccc
gccgtcctgaaagagtgccgccgcataatttccgatagcgaaattatgaaggaagatgac
aacaactggccagagccagaccgggttgggaaacaggagctggagattgtgatggggaat
gagcatatttcttttactacatcaaagattggatcacttgttgatgttcacagtagccag
gatcctgaagggcttcgcatcttttattatcttgtccaggacttgaagtgctttgttttc
tctctcatctctctccacttcaaaatcaagcccatataa
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