KEGG   Populus alba (white poplar): 118042160
Entry
118042160         CDS       T07314                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
palz  Populus alba (white poplar)
Pathway
palz03013  Nucleocytoplasmic transport
palz03015  mRNA surveillance pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118042160
  09122 Translation
   03013 Nucleocytoplasmic transport
    118042160
   03015 mRNA surveillance pathway
    118042160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118042160
   03041 Spliceosome [BR:palz03041]
    118042160
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118042160
Spliceosome [BR:palz03041]
 Complex C
  Other components
   EJC/TREX
    118042160
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 118042160
NCBI-ProteinID: XP_034905646
LinkDB
Position
2:6822080..6824063
AA seq 152 aa
MAAKEGDNGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP
AVLKECRRIISDSEIMKEDDNNWPEPDRVGKQELEIVMGNEHISFTTSKIGSLVDVHSSQ
DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 459 nt   +upstreamnt  +downstreamnt
atggcagcgaaggagggagataacggagagttctaccttcgttactacgtaggtcacaga
ggtaaattcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatac
gccaacaactctaactacaaaaacgacaccatgattcgcaaagaagtcttccttaccccc
gccgtcctgaaagagtgccgccgcataatttccgatagcgaaattatgaaggaagatgac
aacaactggccagagccagaccgggttgggaaacaggagctggagattgtgatggggaat
gagcatatttcttttactacatcaaagattggatcacttgttgatgttcacagtagccag
gatcctgaagggcttcgcatcttttattatcttgtccaggacttgaagtgctttgttttc
tctctcatctctctccacttcaaaatcaagcccatataa

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