Populus alba (white poplar): 118042284
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Entry
118042284 CDS
T07314
Name
(RefSeq) serine/arginine-rich splicing factor RS41-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118042284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118042284
Spliceosome [BR:
palz03041
]
Common components
Common spliceosomal components
SR proteins
118042284
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_Nup35
RRM_5
DUF2129
Motif
Other DBs
NCBI-GeneID:
118042284
NCBI-ProteinID:
XP_034905801
LinkDB
All DBs
Position
2:7961656..7965758
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AA seq
248 aa
AA seq
DB search
MKAIFCGNLDYDARQSDVERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDRIEF
GRKGRRLRVEWTKQERDSKPAGSRRSSANMTPSKTLFVINFDPIHTRTRDLERHFDPYGK
ILSTRIRRNFAFIQYELQEDATKALEATNMSKLMDRVISVEYAARDDDERRNGYSPERRG
RDRSPDRNYDRERSPSPYRRDRGSPDYGHGQNTNARPQRVNHTYDKAEGPEKERYRSRSP
PSQERSRS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctatattttgcggcaatcttgattatgacgcgcgccaatctgatgtggagcgt
ctttttagaagatatgggaggattgacagggtggatatgaagtctggatttgcttttgtc
tatatggaggatgaaagagatgctgaggatgccatccgcaggcttgaccgaatagaattt
gggagaaaaggacgccgtctacgtgttgagtggactaagcaagaacgtgacagtaagcct
gctggttcaagaagatcatcagctaatatgactccatcaaaaactttgtttgtcattaat
tttgatccaattcatacccgaactagggatctggagaggcactttgatccttatggaaaa
atattgagcacaaggattcggaggaattttgcattcattcagtatgagttacaggaagat
gctactaaggcattggaagcaactaatatgagcaagttgatggaccgggtcatttcagtg
gaatatgctgctcgagatgatgatgaaagaaggaacggttacagtcctgagagaagaggc
cgtgacagatctcctgacagaaattatgatcgtgaacgatccccaagtccatatcgtaga
gataggggtagcccagactacggccatggacagaatacaaatgccagacctcaaagagta
aatcatacttatgataaagctgaaggtcctgaaaaggaaagataccgcagccgctcccca
ccatctcaggaaaggtcacgctcttga
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