Populus alba (white poplar): 118042440
Help
Entry
118042440 CDS
T07314
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118042440
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palz01007
]
118042440
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118042440
Enzymes [BR:
palz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
118042440
Amino acid related enzymes [BR:
palz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
118042440
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118042440
Prokaryotic type
118042440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
118042440
NCBI-ProteinID:
XP_034905998
LinkDB
All DBs
Position
13:6050813..6061176
Genome browser
AA seq
596 aa
AA seq
DB search
MPTVSVGRDRLFSALGKSYSREEFEDLCFKFGIELDDVTTEKAIIRKERHLNEEDGGVGD
DDGEIIYKIEVPANRYDLLCLEGIAQALRVFNEEQQTPTYTLASIPKDSMLKMHVKPQTS
SIRPFVVCAVLRDITFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEA
LHPKSINFVPLKQEKSFRADELMEFYKSDMKLKKFLQIIENSPVFPVIHDSKRTVLSLPP
IINGAHSAITLKTKNVFIECTATDLTKANIVLNTMVTIFSAYCQRKFEVEPVEVIYSDGR
SFIYPDLSVYNMEVPLSYITGSIGVSLEAEKVTSLLNRMQLRAEHSVLDDNKCNINVSVP
PTRSDILHPCDVMEDVAIAYGYNDIPKRRLPSMKPLPLNQLEDLIRAEIAMNGFTEVLTW
ILCSNRENFALLNREDDRSSAVIIGNPRSSDFEAVRTSLMPGALKIIGHNKDHPKPIKIF
EVGDVAFLDDSKDVGATNRRHLAALYCGTNSGFELIHSLLDRIMEVLGTPFVPIGDNTGY
YIQRSDAPEFLPGRQASIIYKGKHIGDFGIVHPQVLNNFVITDPCSFLEIDIEHFL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagttagcgtggggagagatcgtttgttctcagccctaggaaaatcctactct
cgagaagagtttgaggatctgtgcttcaagttcggcatcgagctcgacgatgtgacaact
gagaaagcaattattagaaaagagaggcacttgaatgaagaagatggaggagttggtgat
gatgatggagaaatcatctacaaaattgaagttcctgctaacagatatgatttgctctgc
cttgaggggattgcccaagccctccgcgtttttaacgaggagcagcagacaccaacatat
acacttgccagcattcccaaggactcaatgcttaagatgcatgtcaaaccacaaacatcc
tcgattcgtccctttgttgtttgtgctgttctgagagatattacatttgatgaagctagt
tacaacagtttcattgatcttcaagataagcttcatcaaaacatttgtaggcgaagaacc
ctagttgcaattgggactcatgacttggatacactacaaggccctttcacttatgaggct
ttgcatcccaaaagcattaattttgtgccactgaaacaggagaaaagcttcagagctgat
gaactgatggagttttacaagtctgatatgaagctgaagaagttcttacaaataattgag
aattctccagtgtttcctgtcatacatgattctaaaagaactgttttatctctaccgcca
attattaatggtgcacattcggctatcactctgaagactaagaatgttttcattgaatgc
acagccactgatctgacaaaggccaatattgttttgaacacaatggtaacaatcttttca
gcatattgtcaaagaaaatttgaggtggagccagttgaagtgatatattctgatgggagg
tcattcatttaccctgatttatctgtctataacatggaagttcctctttcatatattacc
ggctcaattggagtctctttggaggcagaaaaggttactagtttattaaatcggatgcaa
ttgcgtgctgagcattctgtacttgatgacaacaaatgcaatatcaatgtatcggtacct
ccaacaagaagtgacattcttcacccttgtgatgttatggaggacgttgcaattgcttat
gggtacaatgacattccaaagagaaggctcccatcaatgaagccactgcccttgaatcag
cttgaggatcttatcagagcagagattgcaatgaatgggtttacagaggtcttaacatgg
attttatgctctaatcgagagaattttgccttgttaaatcgagaagatgatcgatcaagt
gcagtgattattggaaatccccgttcctcagattttgaggctgtccgaacaagcctcatg
cctggtgctttgaaaattattggacataacaaagaccatcctaagccaatcaagattttt
gaagtgggtgatgtagcatttttggatgatagtaaagatgttggtgcaactaaccgtcgc
catcttgcagctctgtattgtggcactaactcaggatttgagcttattcattccttgttg
gacagaattatggaagtgctgggaaccccttttgtgccaatcggtgacaatacagggtac
tacatacagcggtcagatgcacccgaatttcttcccggtagacaagctagcatcatttac
aaagggaagcatattggcgattttggtattgtgcacccccaggtcttgaacaactttgtc
attacggatccatgttccttcttggaaattgatattgagcattttttgtaa
DBGET
integrated database retrieval system
