Populus alba (white poplar): 118042490
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Entry
118042490 CDS
T07314
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118042490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118042490
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118042490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
118042490
NCBI-ProteinID:
XP_073260522
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All DBs
Position
14:complement(4152005..4157791)
Genome browser
AA seq
1210 aa
AA seq
DB search
MMDYTLPISKRTRLREAEVYKKLHDEIRKGRNQGKESNAAATGSTNGLNGAQAESVGGLS
YKGSKSPVVLDDSEDDAFLDDCEKGGLEEGLDVVSLDDSDDDEQSEGVESKSFDVGGKKS
GGTDVGGSCSGVESDGEESGRSKVPLPRWQRIVNESYNDVFAHERNEAGVCFLSSGIGNG
SGGVGLKGRESNGVAGRTELQSGFCEKNKDGNVVVVVVDDDDDDDACIILEKDAEELQSS
SGEEETFKDDSDDEDHRVELPESFMVEEEEKEDDGDREQGEMELKRNKVHGIEVLCDSDI
GKIENNVVDMDDSLCVAKRTRSHYNLESAEKRMKLETVSRPLCVDEEKLDDNGDNDEDDT
ETYEAVDVAQKVRSKKGKTKPTGGNGDDVDDGDETCDHRSQRRTIESRKGSRDEHGHGVC
RRKPSKRRRKEYEVVKILANSIFLDQEDVPFKEEREPLKVPVLPLKFTFGIEESSPPVKS
EEEKQLEELWADMALALCLKDTTDDAALDENEDDGHEVEPDTVTLCRQGNHELYLDEEIG
LLCKYCSFVDLEIKYHVPPFDRYPRGKSARRDFVTMQHNIFNDLHHQDSGFDTHPDYDPC
TLAQGTVWNLIPGIGKGMHGHQREGFEFLWKNIAGGIYLDKLKENSNLNGGTGCIISHAP
GTGKTRLTIVFLQTYMQLYPTSRPVIVAPCSMLLTWEAEFLKWGVDIPFHIMNKKNLSGK
ENRTAMDLFRELKPVERGLNAIRMVKLYSWKKERSILGISYRLFEELVGEEKSRTKVSDK
TEDDQVRKVLLELPGLLILDEGHTPRNDKSRIWKALSKVQTQKRIILSGTPFQNNFDELY
NTLCLVKPKFADEISSKHHRAFPKRRGCKRNTDARRNWASLTTAIGKVTDDKLEAQRVEE
LRKMIWQFVHVHKGGVLRERLPGLRDSVVILQPVHLQKTLLENVKQIHGLDHFEMEYSLS
VLSVHPSLLPEKSVGTLEFKFVDRMELEMLRSKPEAGVKTKFLIELIRLCQARNEKVLVF
SQYLEPLNLVIKQLESNFSWIEGEDILYMHGKLKIDERQTLIKHFNNANSNAKVLLASTR
ACSEGINLVGASRVVLLDVLWNPSVERQAISRAYRLGQEKVVYIYHLITSGTMEEEKYFC
QVEKERLSKLVFDCSNKSSSHQKNVFDIAEDKRDKILEEMVQHDKLKLMFKKIIYQPKDT
NLVKSFNLDL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgatggactatacattgcctatatctaaaaggaccaggcttagagaagctgaagtgtat
aagaaattgcatgacgagattaggaaagggagaaaccaagggaaggaaagcaatgctgcc
gctactgggtcaacgaatggacttaatggtgctcaagcggaaagcgttggcgggttgtct
tacaagggtagtaagagtccagttgtcttggatgatagtgaagacgatgcctttttggat
gactgtgaaaagggggggcttgaggaagggttggatgttgtttcccttgacgatagtgat
gatgatgaacagagtgagggagtagagagtaagagttttgacgttggtggtaagaagagt
gggggaacagatgtgggtggaagttgtagtggcgtggaatctgatggagaggagagtggg
agatcaaaggttcctcttcctcgttggcagagaattgtgaacgagagttataatgatgtt
tttgcgcatgagaggaatgaggctggcgtgtgttttttgtcgagtggaattgggaatgga
agtggtggggtcggtttgaagggtagggagagtaatggggtagccggaaggactgagttg
cagtccgggttttgtgaaaagaacaaggatggtaatgttgttgttgttgttgttgatgat
gatgatgatgatgatgcttgtattattttggaaaaggatgcagaggaattgcagagttct
agtggagaagaggaaacctttaaagatgattcagatgatgaggatcatagagtggagtta
ccggagagttttatggttgaggaggaagagaaagaagatgatggtgatagggagcaaggt
gagatggaattgaagaggaacaaagttcatggaattgaagtgttatgcgactctgatatt
ggtaaaattgagaataatgttgtcgacatggatgattctctttgtgtggcaaaacgtacc
cgatcacactataatttggaatcggctgagaagagaatgaagcttgaaacagttagccga
ccactttgtgttgatgaggagaagttagatgataatggtgacaatgatgaagatgatact
gaaacctatgaagcagttgatgttgctcagaaagttcggtctaagaaaggaaaaactaaa
ccaacaggagggaatggtgatgacgttgatgacggtgatgagacttgtgatcataggtct
cagagaaggacaattgagtctagaaaaggcagtagagatgagcatggacatggtgtatgt
agaaggaagcctagtaaaagaaggcgaaaagaatatgaagttgtcaaaattcttgcaaat
tccatttttctggaccaggaagatgtgcctttcaaagaagaaagggaaccactcaaggtg
ccagttcttcctctgaagttcacatttggaattgaagagtcaagtcctcctgttaaatca
gaagaggagaaacaattggaggaactttgggctgacatggccttagctctttgcttaaag
gataccactgatgatgcagcgctggatgaaaatgaagatgacggccatgaggttgaacct
gatacagtcaccctttgtcgtcaggggaatcacgagctttatcttgatgaagaaattgga
cttctatgcaaatattgctcttttgtggatttggaaatcaaataccacgtgccccctttt
gatagataccctagggggaaatcagctaggagagactttgtgacaatgcaacacaatatc
ttcaatgatctccatcaccaagattctggttttgacacacatcctgattatgatccttgc
actcttgcgcaaggcacagtgtggaacttaattcctggtattggaaagggtatgcatgga
catcagcgtgaaggctttgagtttctgtggaaaaacatagctggaggtatttatcttgac
aagctgaaagagaattctaacttaaatggtgggacaggatgtattatatcccatgctcct
gggactgggaaaacccgcctaaccatagtgtttctccagacatacatgcaattatatcca
acaagcaggcctgtaatagttgctccttgcagcatgctccttacatgggaagcagagttt
ttgaagtggggggttgacattccctttcacattatgaacaagaaaaatctttctggaaaa
gaaaataggacagctatggatcttttcagggaacttaaacctgtagaacgtggtctaaat
gccatccgtatggtgaaattatattcttggaaaaaggagaggagtatcctggggatcagt
tacagactttttgaagaacttgttggtgaagaaaagagtagaaccaaagtatcagataag
actgaagatgaccaggtaaggaaagtccttcttgaacttcctggtcttttaatccttgat
gaaggacatacacctcgaaatgacaagagtcgtatctggaaagctctgtcgaaggtccaa
acacaaaaacggattatactctcaggaacacccttccaaaataactttgatgagctttat
aacacactgtgcttggtaaagcctaaatttgcagatgagatctcgtccaaacaccataga
gcttttcctaaaaggcgtggttgcaagagaaatactgatgcgagaaggaattgggcctcc
ttgacaactgcgattggcaaagtcactgatgataaactggaagctcagagggtcgaagag
cttagaaagatgatttggcaatttgtgcatgtacacaagggtggtgtgctacgagaaaga
ctccctggattgagggactctgtggttatcttacagccagtccatttgcagaagaccctt
cttgaaaatgttaagcaaattcatggcctggatcattttgagatggaatattcattgtcc
gtgctttctgtacacccttctctgttgccagagaaatcagttggaaccctagagtttaag
tttgttgatcggatggagttagaaatgcttagatcaaaacctgaggctggagtcaaaaca
aaatttcttatagaactcattcggctttgccaggcgaggaatgagaaagttctggtgttc
agtcaatatcttgagccactgaacttggtaatcaagcagctcgagtcaaatttcagttgg
atcgaaggagaagatatattatatatgcatggaaagcttaaaatagatgaacgtcaaaca
ttgattaagcattttaataatgcaaatagtaatgcaaaagtgttgctcgcatcaactaga
gcttgttctgaagggataaatcttgttggtgcttcaagagtggttttgcttgatgttttg
tggaacccatcggtggaaaggcaagccatcagccgcgcctacaggctagggcaagagaaa
gttgtctatatttaccatctcattacttcaggaacaatggaagaggaaaagtatttttgc
caagttgagaaagagcgattgtcaaagctagtgtttgattgctcaaacaaaagtagcagt
catcagaaaaatgtgtttgatatcgcagaagacaaaagggacaagattctggaagaaatg
gttcagcatgacaagcttaaacttatgtttaaaaagatcatataccaaccaaaagatact
aatctagtcaaatctttcaacttggatttgtaa
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integrated database retrieval system
