Populus alba (white poplar): 118042587
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Entry
118042587 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K04485
DNA repair protein RadA/Sms
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118042587
DNA repair and recombination proteins [BR:
palz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
118042587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
Zn_ribbon_LapB
Lon_C
AAA
AAA_22
AAA_16
NACHT
DUF7125
nSTAND_NTPase5
NTPase_1
nSTAND3
AAA_19
SLFN-g3_helicase
Vps36-NZF-N
AAA_29
AAA_5
DAP3
Motif
Other DBs
NCBI-GeneID:
118042587
NCBI-ProteinID:
XP_034906192
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Position
1:complement(20013689..20024377)
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AA seq
644 aa
AA seq
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MQTTAMKVVRSFYTYKSRFLLKPNPISLSRHFHLTTSPFLSKESGLAVHSSANDPIPIDS
TKKAPLVWSVFDPISDGTVAQSGASGSAGNGESELRLSSFDEEVDGLAGENLIKREKSQM
GLPSNRNEIEDLKKEKRYVGVKKGSSVNGAVGSGDRAVYRTKGKSKTSWVCEICGFTSGQ
WWGSCRSCNEVGTMKQFFEAKIGSGNKVSGIEASENAVRSWMPQKPGELRPLRLTDVNRG
MNMLNWRIPLSGLFGSEVERVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAIIADSEDLG
GSAPVVYVSGEESVEQIGNRADRMEIGTEELYLYSSTDIEDILGKIHHLSPRALIIDSIQ
TVYLKGVAGSAGGLSQVKECTSALLRFAKTTNIPILLIGHVNKSGDIAGPRVLEHIVDVV
LYMEGEKYSSHRLLRPVKNRFGSTDELGVFEMSQLGLAVVSNPSEIFLTEQHSDSDFLAG
LAVAVIMDGSRSFLIEIQALCVSGSSVSRHINGIQSSRADMIISVLIKQAGLMLQENAIF
LNVVSGVMLTETAGDVAIAAAICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTV
AKLGYKMCVIPKSAEKSLANLGFQGMKIVGCKNLKEVINTVFKA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccacagccatgaaagtagtaagatcattctacacttacaaaagccgtttcctc
ttaaaacccaaccctatttctctctcccgccatttccacctcaccacctcccctttcctt
tctaaagaatcaggcctcgctgtccattcctccgcaaacgaccccattcccattgacagc
accaaaaaagcccctctagtttggagtgttttcgacccaatctcggatgggacagtggcg
cagagtggcgccagcgggagtgccgggaatggagaatcggagctcaggctgtccagtttt
gatgaggaagtggatggcttagcgggagagaatttaatcaaacgagagaaaagccagatg
ggattgccgagtaatcgtaatgaaatagaggatttgaagaaggaaaagagatatgtgggt
gtgaagaaggggagttcagttaatggggcggtggggtctggggatagagcggtgtatagg
acgaaggggaaaagtaaaactagttgggtttgcgaaatttgtgggtttacttcagggcaa
tggtgggggtcttgtcgatcgtgtaatgaagtagggacaatgaagcagttttttgaggcg
aaaattgggagtgggaataaggtgagtgggattgaggcttcggagaatgcagtgcggtct
tggatgccacagaagcctggggagttgcgtcctttgaggctgacagatgtgaatcgtggg
atgaatatgttgaattggcgtattcctttgtctggactttttggaagtgaagttgaaagg
gtgcttgggggtggtcttgttccaggttctttggttttggttggtggtgatcctggggtc
ggcaagagcacattgttattgcagattgctgcaataatagctgacagtgaggatcttggt
ggatcagctccagttgtatatgtttctggtgaagagagtgtcgagcaaattggaaacaga
gcagaccgtatggagattggaactgaggagctttacttatattccagtactgatattgag
gatatacttggaaaaattcatcatctctccccccgtgctctgattattgattcaattcaa
acagtttatctgaaaggagttgctggaagtgctggaggactgtcacaggttaaggaatgc
acatcagcactgttgcgttttgcgaaaacaactaacatcccaatacttttgattggacat
gtgaataaatctggagatattgcagggcctcgtgtattggagcacattgttgatgttgtc
ttatatatggaaggggagaagtactcatctcatcggttgcttcgacctgtgaagaatcgt
tttgggtccacagatgagcttggagtttttgaaatgtcacagttgggtctggcagttgtt
tccaatccaagtgagatattcttaactgagcagcactcagattcagattttttagctggg
ctagctgttgctgtaataatggatggatctcgaagtttcctaattgaaattcaggcactg
tgtgtctctggttcatcagtttcaaggcacattaatggaatccaatcaagccgagctgac
atgatcatatctgttcttataaagcaagctggtttaatgctccaagagaatgccatcttt
ttgaatgttgttagcggggtaatgctgacagagactgctggtgatgttgcaatagcagct
gcaatttgcagcagtttcttggaatttcccattcccaataacattgcattcatcggagaa
attggccttggtggcgagcttcgcgcagtacccaggatggagaaaagagtacatactgtc
gcaaaactgggatataaaatgtgcgtaatcccgaaatcagctgaaaaatctcttgcaaat
ctaggtttccaagggatgaaaattgttgggtgcaagaatctaaaagaagtcatcaacact
gtattcaaggcttga
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