Populus alba (white poplar): 118043129
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Entry
118043129 CDS
T07314
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118043129
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
118043129
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
118043129
NCBI-ProteinID:
XP_034906874
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Position
10:17031224..17032735
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AA seq
396 aa
AA seq
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MEMLMLCLHSILFFIFLVSLNINISSAKTSYNVLTYGARPNGKTDSTQAFLDAWTAACGS
TAPTMIYIPKGRYLLGSMAFTGGNCKSPDITIRIDGTLIAPEDYRILGLASNWLSFEGVS
GVSIVGGALDAKGSPLWDCKSKGSNCPAGATTLSFVNSNNIKIDGLLSLNSQMFHIVING
CQNVKVQGVRVIAAGDSPNTDGIHVQLSTDVAIMNSSIKTGDDCISIGPGTKNLWIERVR
CGPGHGISIGSLAKTMDEPGVQNVTVKSTIFTGTTNGFRIKSWARHSTGFVQAIRFIGAT
MINVQNPIIIDQNYCPHNLNCPNQVSGIQISDVMYQGIRGTSATPVAIKFDCSFKYPCKG
IRLQNVNLTYFNKEAQSTCTNAIGKISGQVQPDNCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgttgatgttgtgtctacattctatcctgtttttcattttcttggtcagctta
aacattaacatatcatctgccaagacaagttataatgtacttacttatggtgccagacca
aatgggaaaacggactccacccaagccttccttgatgcctggacagcggcgtgtggctct
actgctccgactatgatttacataccaaaaggaaggtatctgcttggttctatggccttt
acaggtggtaattgcaaaagtcctgatatcactataaggattgatgggaccctgattgct
cccgaggattatcgcattcttggtctggccagtaattggcttagctttgaaggtgtcagc
ggtgtctccattgttgggggggctcttgatgctaagggatcacccttgtgggattgcaaa
tccaaaggcagcaattgccctgctggagctacgactttgagctttgtgaactccaacaac
ataaagatcgatggattgctgtcactaaacagccaaatgttccacattgtgataaatggc
tgccaaaatgtgaaagtccaaggagtcagagtgatagctgctggtgacagcccaaacaca
gacggcattcatgtccaattatcaactgatgttgcgatcatgaattcttcgattaaaacc
ggggatgattgtatttcaattggacccggaactaagaacctgtggatcgaaagggtcaga
tgtggccccggtcacggcatcagtatcggaagcttagccaagaccatggatgagcccggg
gttcagaatgtgacagttaagagtacaatttttactggcactacaaatgggtttagaata
aaatcgtgggccagacacagcactggatttgttcaagcaattcgattcattggagccact
atgattaatgtccaaaatcccatcatcatcgatcaaaattactgtccgcacaatttaaat
tgccccaatcaggtatcgggcatacaaataagtgatgtcatgtatcaaggcattcgagga
acatctgccacaccagttgctataaaatttgattgcagcttcaaatatccatgcaaaggt
ataagactgcagaatgtaaacttgacctacttcaacaaagaagctcagtcaacctgcacc
aacgccattgggaaaatatctggtcaagttcagccggataattgtttgtaa
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