Populus alba (white poplar): 118043130
Help
Entry
118043130 CDS
T07314
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Module
palz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118043130
Enzymes [BR:
palz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
118043130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Nab2-zf4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118043130
NCBI-ProteinID:
XP_034906875
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MAKLLCIPSLLLFIFLVSLNINISSAKTSYNVLTYGARPNGKTDSTQAFLDAWTAACGST
GPTMIYIPKGRYLLGSVAFTGGNCKSPDITIRIDGTLIAPEDYRILGLARNWLSFEGVSG
VSIVGGALDAKGSPLWDCKSKGRNCPAGATTLSFVNSNNIKIDGLLSLNSQMFHIVINGC
QNVKVQGVRVIAAGDSPNTDGIHVQLSTDVAIMNSSIKTGDDCISIGPGTKNLWIERVRC
GPGHGISIGSLAKTMDEPGVQNVTVKSTIFTGTTNGFRIKSWARHSTGFVQAIRFIGATM
INVQNPIIIDQNYCPHNLNCPNQVSGIQISDVMYQGIRGTSATPVAIKFDCSFKYPCKGI
RLQNVNLTYFNKEAQSTCTNAIGKTYGQVQPDNCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttattgtgcattccatctctactgctcttcattttcttggtcagcttaaac
attaacatatcatctgccaaaacaagttataatgttcttacttatggtgccagaccaaat
gggaaaacagactccacccaagccttccttgatgcctggacagcggcatgtggctctacc
ggtccgactatgatttacataccaaaaggaaggtatctgcttggttctgtggcctttaca
ggtggtaattgcaaaagtcctgatatcactataaggattgatgggaccctgattgctccc
gaggattatcgcattcttggtctcgccagaaattggcttagctttgaaggtgtcagcggt
gtctccattgttgggggggctcttgatgctaagggatcacccttgtgggattgcaaatcc
aaaggcagaaattgccctgctggagctacgactttgagctttgtgaactccaacaacata
aagatcgatggattgctgtcgctaaacagccaaatgttccacattgtgataaatggctgc
caaaatgtgaaagtccaaggagtcagagtgatagctgctggtgacagcccaaacacagac
ggcattcatgtccaattatcaactgatgttgcgatcatgaattcctcgattaaaaccggg
gatgattgtatctccattggacccggaactaagaacctgtggatcgaaagggtcagatgt
ggccccggtcacggcatcagtatcggaagcttagccaagaccatggatgagcccggggtt
cagaatgtgacagtaaagagtacaatttttacgggcactacaaatgggtttagaattaag
tcatgggccagacacagcactggttttgttcaagcaattcgattcattggagccactatg
attaatgtccaaaatcccatcatcatcgatcaaaattactgtccgcacaatttaaattgc
cccaatcaggtatcgggcatacaaataagtgatgtcatgtatcaaggtattcgaggaaca
tctgccacaccagttgctataaaatttgattgcagcttcaaatatccatgcaaaggtata
agactgcagaatgtaaacttgacctacttcaacaaagaagctcagtcaacttgcaccaac
gcgattggaaaaacatatggtcaagttcagccagataattgtttgtaa
DBGET
integrated database retrieval system