Populus alba (white poplar): 118043141
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Entry
118043141 CDS
T07314
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118043141
09123 Folding, sorting and degradation
03018 RNA degradation
118043141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118043141
03041 Spliceosome [BR:
palz03041
]
118043141
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118043141
mRNA degradation factors
5'-3' decay
Lsm complex
118043141
Spliceosome [BR:
palz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118043141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
118043141
NCBI-ProteinID:
XP_034906892
LinkDB
All DBs
Position
10:complement(17112047..17114085)
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AA seq
91 aa
AA seq
DB search
MSSGGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggaggagagaagggatcgaccaccacgaaaacacctgctgatttcctcaaa
tctatacgcggccgccctgttgtagtcaagctcaattctggagttgattatagaggtatt
ttagcttgtcttgatgggtacatgaacatagcaatggaacaaacagaggaatacgtaaat
ggccaactgaaaaacaaatatggtgatgctttcatccgaggaaataatgttctgtacatc
agcacttcaaagaggacacttgcagatggtgcatag
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