KEGG   Populus alba (white poplar): 118043141
Entry
118043141         CDS       T07314                                 
Name
(RefSeq) sm-like protein LSM36B
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
palz  Populus alba (white poplar)
Pathway
palz03018  RNA degradation
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118043141
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118043141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118043141
   03041 Spliceosome [BR:palz03041]
    118043141
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118043141
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     118043141
Spliceosome [BR:palz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    118043141
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 118043141
NCBI-ProteinID: XP_034906892
LinkDB
Position
10:complement(17112047..17114085)
AA seq 91 aa
MSSGGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq 276 nt   +upstreamnt  +downstreamnt
atgtcaagtggaggagagaagggatcgaccaccacgaaaacacctgctgatttcctcaaa
tctatacgcggccgccctgttgtagtcaagctcaattctggagttgattatagaggtatt
ttagcttgtcttgatgggtacatgaacatagcaatggaacaaacagaggaatacgtaaat
ggccaactgaaaaacaaatatggtgatgctttcatccgaggaaataatgttctgtacatc
agcacttcaaagaggacacttgcagatggtgcatag

DBGET integrated database retrieval system