Populus alba (white poplar): 118043216
Help
Entry
118043216 CDS
T07314
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
palz
Populus alba (white poplar)
Pathway
palz04142
Lysosome
palz04144
Endocytosis
palz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118043216
04142 Lysosome
118043216
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118043216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118043216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118043216
Membrane trafficking [BR:
palz04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118043216
Exosome [BR:
palz04147
]
Exosomal proteins
Proteins found in most exosomes
118043216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
118043216
NCBI-ProteinID:
XP_034906986
LinkDB
All DBs
Position
10:complement(17635493..17646648)
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAANAPITMKEVLTLPAIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSYQMPEQIVFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLQSNQIINYKCDPSEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAASFAQYKVPGNENPSTLISFATKSFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYAITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASTVGGFYAINRRGQVLLATVNEAMIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
PGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECTEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYAPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLAEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRALQHYTDLPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACVKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVADLTHYLYSSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDATQFLEVIRAAEDANVYHDLLKYLLMVRQKTKEPKVDSEIIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEALYEAARIIFQFIANWAKLASTLVKLKQFQSAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMIAVQSNNVSAVNEALNQIYVEEEDYERLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRQDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKYKIEAQKEVKAKEQEEKDVIAQQNMYAQLLPLALPAPPMPGMGGPTMGGGF
APPPPMGGMGMPPMPPFGMPPMGSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctaacgccccgatcaccatgaaggaagtcttaactttaccggctatcggg
attagtcctcagtttattacgtttacaaatgtaacgatggaatcagacaagtatatatgt
gtacgggaaacagcgccacaaaatagtgttgtaattatcgatatgaacatgccaatgcag
ccattgagacgccctatcactgcagattctgctctcatgaatccaaattctagaatcctt
gctttgaaagcccaacttccgggaactactcaggatcacttacaaatatttaacatcgag
atgaaagcaaaaatgaaatcataccagatgcctgagcagattgtcttttggaagtggata
accccaaagatgctgggcctggttacacagacatcagtttatcattggtctattgaaggt
gattctgaaccagtgaagatgtttgagagaactgctaatttgcaaagcaatcagattata
aactacaaatgtgacccttctgagaaatggttagttttgattggaattgctcctggctca
cctgagcggcaacaattggttaaagggaacatgcaacttttctctgtggatcaacaacgt
agccaagctcttgaagcacatgccgcatcatttgcacaatataaggttccaggaaacgag
aacccttccactctgatttcttttgccacaaaatcttttaatgctgggcagattacatcg
aagctgcatgttattgagcttggtgcccagccagggaagccatcatttacgaagaaacag
gcggatctgttctttcctcctgattttgctgatgactttcctgtggcaatgcagatatcc
cacaaatacagtttgatttatgcaatcacgaagcttgggctgctatttgtttatgatttg
gagacagctactgcagtataccgaaacagaattagtccagatccaatatttttgacagcc
gaggcttcaacggtgggagggttttatgccattaataggcgaggccaggtgttgctggct
actgtaaatgaagcaatgattgtgccatttgttagtggccagttgaataatctggagctt
gctgtcaatcttgccaaaagaggaaaccttcctggtgctgagaatctggttgtccagcgt
ttccaagaattatttgctcaaacaaagtataaagaagctgctgagcttgctgctgagtca
ccacaaggcattcttcgaactcctgacacagttgccaagtttcagagtgttccagtgcaa
cctgggcaaacccctcccttattgcaatactttgggacccttttaactagaggaaagctt
aatgcatttgagtcgttggaattgtcccgccttgtggttaatcagaacaaaaagaatctt
ttggagaactggctggcagaggacaagttggagtgtactgaggaactgggagacctcgtg
aagacagtggataatgatcttgctctgaaaatatatattaaagctagggcaacccctaaa
gttgttgcagcttttgctgagagaagggagtttgacaaaattttgatatactcgaagcag
gttggctatgctcctgactatttattccttctgcaaacaattctccgtacagatccacag
ggtgctgttaactttgctttgatgatgtcccaaatggaaggtggctgtccagttgactac
aataccattactgatctctttcttcagaggaacttgatccgtgaggcgactgcctttctg
ttggatgttttgaagccaaatttagcagaacatggttacctccaaacaaaggttctggag
ataaatctggtaacatttcctaacgtagctgatgctattctagccaatgggatgtttagc
cactatgatcgtcctcgtattgctcaactctgtgaaaaagctggtctttacatccgagcc
ctgcagcattatacggatttgccagatattaaacgtgtgatcgtgaatacacatgcaata
gagccacaggcacttgttgagttttttggcactctttcacgagaatgggctctggagtgc
atgaaggatcttttactggttaatctaagaggcaaccttcagataattgttcagactgcc
aaggaatattgtgagcagttgggtgttgatgcatgtgtaaaacttttcgaacaattcaaa
tcatatgaagggctgtactttttcttggggtcatatttgagttccagcgaggatcctgat
atacattttaagtacattgaggcagctgctagaaccggacaaataaaggaggttgagcgt
gttactagggagtcaaatttttatgatcctgaaaagacaaagaactttctgatggaagcc
aagcttccggatgcaaggcctctaataaatgtctgtgaccgttttggttttgttgctgat
ctcacacactacctctattcaagcaacatgcttcgttatatagagggttatgttcaaaag
gtgaacccagggaatgctcctttagttgttgggcagctgttagatgatgaatgccctgaa
gactttatcaagggccttattctttctgtccgttctttgcttccagttgagccccttgtg
gaggaatgtgagaagagaaatcgacttcgtttgctcactcagttcttggaacatcttgtg
agtgagggaagccaagatgtacatgttcacaatgctcttggtaaaatcatcattgatagc
aataacaacccagaacacttcctcaccaccaatccttactatgattcccgggttgtgggc
aagtattgtgagaaacgtgatcccacccttgctgttgtggcttaccggagaggacaatgt
gatgaagaactcatcaatgtcactaataagaactctttgttcaagttgcaagctagatat
gtggttgaaaggatggatggtgatctttgggagaaggttctgaatcctgaaaatgaatac
cgaagacagcttattgatcaagttgtatctactgctttgcctgaaagtaagagcccagag
caagtttctgctgctgttaaagctttcatgactgctgatctgccccatgaattgattgag
cttcttgagaagattgtgctccaaaactctgcattcagtggaaatttcaatctccaaaac
ctacttatcttgacagcgattaaggccgatccttctagggttatggattatattaataga
ttagataactttgatggacctgctgttggggaagtggcagttgaagctcagctatacgag
gaagcatttgcaattttcaagaagttcaacttgaatgttcaagctgttaatgttttattg
gataacatccaaagcattgaccgtgctgtggagtttgcattccgtgttgaagaagatgct
gtttggagccaggtggccaaggcccaactcagagaggggcttgtgagtgaagcaattgag
tcatttattcgtgcagatgacgctactcaattcctggaagtcattcgtgctgctgaggat
gcaaatgtctatcatgatttgttgaagtaccttctcatggttaggcagaagacaaaagag
ccgaaggtggatagtgagattatttttgcttatgcaaagattgataggttgagtgacatt
gaggagttcattctcatgccaaatgtggcaaatctccaaaatgttggcgatcgcttatat
gatgaagctctttacgaggctgcaagaattatattccaatttatagcaaactgggccaag
ttggcaagcacactagtgaagttgaaacagttccaaagtgctgttgatgcagctcggaaa
gccaacagtgccaagacatggaaggaagtttgctttgcttgtgttgatgcagaggagttc
cgtctggctcagatatgtggtcttaacatcattatacaggtggatgatttggaggaggtc
agcgaatattaccagaacagaggatacttcaatgaattgatctctctcatggagagtggt
ttaggtttagaacgtgcacacatggggattttcacggagttgggagtgctgtatgctaga
tatcgtcctgagaaactcatggagcacattaaattgttctcaacccgtctcaacatcccc
aagcttatccgagcctgtgatgaacagcaacactggaaggaacttacctatttgtacatt
caatatgatgaatttgataatgctgcaactaccattatgaaccattccccggaggcatgg
gatcacatgcaattcaaagatgttgctgtcaaagttgctaatgtagagctatattataag
gccgtgcatttctacttgcaagaacaccctgatcttatcaatgatcttctcaatgtgctg
gcacttcgtgtggaccatactcgtgttgttgacattatgcggaaggctggtcatttgctt
cttgtgaagccatacatgatcgcagttcagagcaacaacgtgtctgctgtgaatgaggct
ttgaatcaaatttatgtagaagaggaagactatgaaagattgcgtgaatcaattgatttg
catgataactttgatcagattggccttgcacagaagattgagaaacatgagcttcttgaa
atgaggcgtgtggctgcatacatttacaagaaggcaggaagatggaagcaatccattgca
ttgtcaaagaaagataacctttataaagatgccatggagacagcatcacagtctggtgat
cgtgaacttgcagaggagttgctggtttatttcattgaacagggcaagaaggaatgcttt
gcatcgtgcctctttgtctgttatgatttgattcgacaagatgttgcccttgagcttgcc
tggatgaataatatgattgactttgctttcccgtacctgttgcagtttatccgtgaatac
acaggcaaagttgatgaactcgtgaagtacaaaattgaggcgcagaaagaagtcaaggcc
aaagagcaggaagagaaggatgtaattgctcagcagaacatgtatgctcagttacttcct
cttgctttgcctgcaccgcccatgcctggtatgggtggaccaacaatgggaggaggtttt
gctccaccaccacccatgggtggaatggggatgcctccaatgccaccttttggcatgcca
ccgatgggcagctactga
DBGET
integrated database retrieval system
