KEGG   Populus alba (white poplar): 118043480
Entry
118043480         CDS       T07314                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
  KO
K12195  charged multivesicular body protein 6
Organism
palz  Populus alba (white poplar)
Pathway
palz03250  Viral life cycle - HIV-1
palz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118043480
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118043480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:palz04131]
    118043480
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:palz04147]
    118043480
Membrane trafficking [BR:palz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    118043480
Exosome [BR:palz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118043480
  Exosomal proteins of other body fluids (saliva and urine)
   118043480
SSDB
Motif
Pfam: Snf7 TINF2_N IL34 PBP1_XylR
Other DBs
NCBI-GeneID: 118043480
NCBI-ProteinID: XP_034907358
LinkDB
Position
7:12944645..12948583
AA seq 222 aa
MGNLFVKKPKITDVDRAILSLKTQRRKFAQYQQQLETVIEAEKLAAKDLIREKRKDRALL
ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFEDLETQMAVQDLPEVPTIAVSE
DQEQKLDLPDVPTKPPVLVDDAEISSAEVPTKRKVLEEPLPA
NT seq 669 nt   +upstreamnt  +downstreamnt
atgggaaatttatttgtgaagaaaccaaagataactgatgttgatcgagccattctctct
ctcaagactcaaagacgcaagtttgcccaatatcaacaacagcttgaaactgtgattgaa
gcggaaaagctagcagctaaagatttgattcgtgagaagagaaaggacagggcattgtta
gcgttgaagaagaagaaaacacaagaagaattgctgaagcaagtggatacgtggctcatt
aatgtcgaacaacaattggcagatattgagctggccagcaagcagaaagctgtatttgag
agtttgaagtcaggtactgatgcaatcaaggcgatacaaagtgaggtcaatctggatgat
gttcagaagctaatggatgataccgcagaagctaaagcttaccaagatgaaattaatgct
atcctgggggaaaaactatcagcagaagatgaagaggagattttagctgaatttgaggac
ttggaaactcagatggccgttcaagacttgccagaagtgcccactatagctgtgtctgag
gaccaggagcagaagttggaccttcctgatgtaccaaccaaaccacctgtgctggtggat
gatgctgaaatttcttcagctgaggtccccactaagagaaaagttttggaggaaccattg
ccagcatga

DBGET integrated database retrieval system