Populus alba (white poplar): 118043544
Help
Entry
118043544 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
palz03015
mRNA surveillance pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118043544
09122 Translation
03013 Nucleocytoplasmic transport
118043544
03015 mRNA surveillance pathway
118043544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118043544
03041 Spliceosome [BR:
palz03041
]
118043544
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118043544
Spliceosome [BR:
palz03041
]
Complex C
Other components
EJC/TREX
118043544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
118043544
NCBI-ProteinID:
XP_034907448
LinkDB
All DBs
Position
7:complement(11595378..11600805)
Genome browser
AA seq
750 aa
AA seq
DB search
MSSPYPVLGTKPIDQWKVTELKEELKRRRLKTNGLKDDLIRRLDDALRVEMENDEALRTE
RESVKALRSEQKNAAKAVVDVDNGVHLENPPILGVKMEEAVPVVAEMVKDVVDDAANRDE
KVDNVMIQVGTTEIVKAMGTGELQEEVQMGGIDSSSTDEDLNVHASTVETSITVTESVVS
EVALSVKATGTGELQEEVQMGGIDSSRKEEDLNVHATTVETSITVAKSVVPEVALSGQDV
QNSGTQEANENSNIQLENEGLKPQLENESLKPPDEDATLDSSAPDNQVSEVSPSLGFQVK
SDSISTDSVSINEKIELKDNIIADHVKLELDNVKPEMVEPSFSNVVPVGGESHPMDVEEP
QEKRESVEEKDDSSGANAYMSKNNDSVDVGYSEKLNLDRSSGDDSMEEDVLECKQIDSKY
NSDEVGDGSEKKNEGPVVKEENLVGVAGKDLSTDQKEVHVENKIHPVVPVEKRKFNDQEI
VGNSEPLKRQRRWNSENIKVPEQQSSNLTPTTTPKDGFQPAPLRRNFSRSESSVSEEAPK
ERVVPPSQKPVTNSLRIDRFLRPFTLKAVQELLGKTGSVTSFWMDHIKTHCYVTYSSVEE
ATETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMRVDAPPQSPSTPVTPSAAAPAPPTLQP
QPSPRQQVSRQQLPPPPSLPPPPPLTNPPHTRERVDLPPPPPLPEKHDPPIVTLDDLFRK
TKTAPRIYYLPLLEEQVAAKLAERGKNTKQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccatatccagttcttggaacaaaacccatagaccagtggaaggttactgag
ttaaaagaagagcttaaaaggaggagattgaaaaccaatggtttgaaggatgacttgatt
agacggttggatgacgcacttcgtgttgagatggaaaatgatgaagcacttcgcactgag
agggaaagtgtgaaagcactacgcagcgagcagaaaaatgctgcgaaggctgtggtggat
gtggataatggtgttcatttagagaacccacctatattaggggtgaaaatggaagaggca
gtaccagttgttgctgagatggttaaagatgttgtggatgatgccgctaatagagatgag
aaggtggataatgttatgattcaggttggcaccactgagattgtgaaagccatgggtaca
ggagaacttcaagaagaggtccaaatgggtggtattgattcttctagtacagatgaggat
ctcaatgttcatgcaagtactgtggagaccagtattactgttaccgagagtgtggtttca
gaagtagcattgagtgtgaaagccacgggtacaggagaacttcaagaagaggtacaaatg
ggtggtattgattcttctaggaaagaagaggatctcaatgttcatgccactactgtggaa
accagtattactgttgccaagagtgtggtgccagaagtagcattgagtgggcaagatgtg
cagaattctggaacacaggaggcaaatgagaactcaaatatccagctggagaatgagggt
ttaaagccccagctggagaatgagagtttaaagcctccagatgaggatgccacgcttgac
tcttctgctccagacaaccaggtatctgaggtcagccctagtttagggtttcaagtaaaa
tctgattctatttctactgattctgtatcaattaatgaaaagattgaactaaaggataat
ataattgctgatcatgtcaaattagaactagataatgttaagccagagatggtggaacca
tcattcagtaatgttgtcccagttggtggtgaatcacatccgatggatgttgaagagcca
caagagaagagggaatctgttgaagagaaagatgacagcagtggtgcaaatgcatatatg
agcaagaataatgatagtgttgatgtggggtactcggaaaagttgaatttagacaggagt
tctggtgatgactccatggaggaagatgttttagaatgtaagcaaattgattcaaagtat
aattctgatgaagtgggtgatgggagtgaaaagaaaaatgaagggcctgttgtgaaggag
gaaaatcttgttggtgttgctgggaaggacttatctactgatcaaaaggaggtccatgtt
gagaataagattcatccagttgtgcctgtggagaaaagaaaatttaacgatcaagaaatt
gttggaaactcggaacctttgaagcggcaacgcagatggaattctgagaacatcaaggtt
cctgaacagcaaagctcaaatttgacacccaccaccacacctaaggatgggtttcagcct
gctcctttgaggcgcaacttctcccgttctgaatcctctgttagtgaggaggcacccaag
gaacgtgttgttccaccatcacaaaaacctgtgaccaattctctcagaattgatcgtttt
ctacgtccttttactctgaaagctgtccaagaactcctgggcaaaactgggtctgtcaca
agtttttggatggatcatatcaaaacccattgctatgttacgtattcatctgtggaagaa
gccacggagacacggaatgctgtttataacctacaatggccaccaaatggtggacgcctt
ttagtggctgagtttgttgatcctcaggaagtgaaaatgcgggtggatgctcctccccag
tctccatctacacctgtcactcctagtgctgctgcacctgctcctcccaccctgcagcca
caaccctctcctcgtcaacaggtttctaggcagcaacttccacccccaccttcccttcca
cctcctccaccactaactaacccgccccataccagggaacgagttgatcttcctccacca
cctccacttcctgagaagcatgacccacccattgtcactctggatgacctcttccggaaa
accaaaacagcccctcgaatctactacttaccattattggaagagcaagttgcagcaaaa
cttgcagaacgtggaaaaaacaccaagcaatag
DBGET
integrated database retrieval system