KEGG   Populus alba (white poplar): 118043544
Entry
118043544         CDS       T07314                                 
Name
(RefSeq) uncharacterized protein
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
palz  Populus alba (white poplar)
Pathway
palz03013  Nucleocytoplasmic transport
palz03015  mRNA surveillance pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118043544
  09122 Translation
   03013 Nucleocytoplasmic transport
    118043544
   03015 mRNA surveillance pathway
    118043544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118043544
   03041 Spliceosome [BR:palz03041]
    118043544
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118043544
Spliceosome [BR:palz03041]
 Complex C
  Other components
   EJC/TREX
    118043544
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 118043544
NCBI-ProteinID: XP_034907448
LinkDB
Position
7:complement(11595378..11600805)
AA seq 750 aa
MSSPYPVLGTKPIDQWKVTELKEELKRRRLKTNGLKDDLIRRLDDALRVEMENDEALRTE
RESVKALRSEQKNAAKAVVDVDNGVHLENPPILGVKMEEAVPVVAEMVKDVVDDAANRDE
KVDNVMIQVGTTEIVKAMGTGELQEEVQMGGIDSSSTDEDLNVHASTVETSITVTESVVS
EVALSVKATGTGELQEEVQMGGIDSSRKEEDLNVHATTVETSITVAKSVVPEVALSGQDV
QNSGTQEANENSNIQLENEGLKPQLENESLKPPDEDATLDSSAPDNQVSEVSPSLGFQVK
SDSISTDSVSINEKIELKDNIIADHVKLELDNVKPEMVEPSFSNVVPVGGESHPMDVEEP
QEKRESVEEKDDSSGANAYMSKNNDSVDVGYSEKLNLDRSSGDDSMEEDVLECKQIDSKY
NSDEVGDGSEKKNEGPVVKEENLVGVAGKDLSTDQKEVHVENKIHPVVPVEKRKFNDQEI
VGNSEPLKRQRRWNSENIKVPEQQSSNLTPTTTPKDGFQPAPLRRNFSRSESSVSEEAPK
ERVVPPSQKPVTNSLRIDRFLRPFTLKAVQELLGKTGSVTSFWMDHIKTHCYVTYSSVEE
ATETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMRVDAPPQSPSTPVTPSAAAPAPPTLQP
QPSPRQQVSRQQLPPPPSLPPPPPLTNPPHTRERVDLPPPPPLPEKHDPPIVTLDDLFRK
TKTAPRIYYLPLLEEQVAAKLAERGKNTKQ
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgtcttcaccatatccagttcttggaacaaaacccatagaccagtggaaggttactgag
ttaaaagaagagcttaaaaggaggagattgaaaaccaatggtttgaaggatgacttgatt
agacggttggatgacgcacttcgtgttgagatggaaaatgatgaagcacttcgcactgag
agggaaagtgtgaaagcactacgcagcgagcagaaaaatgctgcgaaggctgtggtggat
gtggataatggtgttcatttagagaacccacctatattaggggtgaaaatggaagaggca
gtaccagttgttgctgagatggttaaagatgttgtggatgatgccgctaatagagatgag
aaggtggataatgttatgattcaggttggcaccactgagattgtgaaagccatgggtaca
ggagaacttcaagaagaggtccaaatgggtggtattgattcttctagtacagatgaggat
ctcaatgttcatgcaagtactgtggagaccagtattactgttaccgagagtgtggtttca
gaagtagcattgagtgtgaaagccacgggtacaggagaacttcaagaagaggtacaaatg
ggtggtattgattcttctaggaaagaagaggatctcaatgttcatgccactactgtggaa
accagtattactgttgccaagagtgtggtgccagaagtagcattgagtgggcaagatgtg
cagaattctggaacacaggaggcaaatgagaactcaaatatccagctggagaatgagggt
ttaaagccccagctggagaatgagagtttaaagcctccagatgaggatgccacgcttgac
tcttctgctccagacaaccaggtatctgaggtcagccctagtttagggtttcaagtaaaa
tctgattctatttctactgattctgtatcaattaatgaaaagattgaactaaaggataat
ataattgctgatcatgtcaaattagaactagataatgttaagccagagatggtggaacca
tcattcagtaatgttgtcccagttggtggtgaatcacatccgatggatgttgaagagcca
caagagaagagggaatctgttgaagagaaagatgacagcagtggtgcaaatgcatatatg
agcaagaataatgatagtgttgatgtggggtactcggaaaagttgaatttagacaggagt
tctggtgatgactccatggaggaagatgttttagaatgtaagcaaattgattcaaagtat
aattctgatgaagtgggtgatgggagtgaaaagaaaaatgaagggcctgttgtgaaggag
gaaaatcttgttggtgttgctgggaaggacttatctactgatcaaaaggaggtccatgtt
gagaataagattcatccagttgtgcctgtggagaaaagaaaatttaacgatcaagaaatt
gttggaaactcggaacctttgaagcggcaacgcagatggaattctgagaacatcaaggtt
cctgaacagcaaagctcaaatttgacacccaccaccacacctaaggatgggtttcagcct
gctcctttgaggcgcaacttctcccgttctgaatcctctgttagtgaggaggcacccaag
gaacgtgttgttccaccatcacaaaaacctgtgaccaattctctcagaattgatcgtttt
ctacgtccttttactctgaaagctgtccaagaactcctgggcaaaactgggtctgtcaca
agtttttggatggatcatatcaaaacccattgctatgttacgtattcatctgtggaagaa
gccacggagacacggaatgctgtttataacctacaatggccaccaaatggtggacgcctt
ttagtggctgagtttgttgatcctcaggaagtgaaaatgcgggtggatgctcctccccag
tctccatctacacctgtcactcctagtgctgctgcacctgctcctcccaccctgcagcca
caaccctctcctcgtcaacaggtttctaggcagcaacttccacccccaccttcccttcca
cctcctccaccactaactaacccgccccataccagggaacgagttgatcttcctccacca
cctccacttcctgagaagcatgacccacccattgtcactctggatgacctcttccggaaa
accaaaacagcccctcgaatctactacttaccattattggaagagcaagttgcagcaaaa
cttgcagaacgtggaaaaaacaccaagcaatag

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