Populus alba (white poplar): 118043942
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Entry
118043942 CDS
T07314
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
palz
Populus alba (white poplar)
Pathway
palz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
118043942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118043942
03029 Mitochondrial biogenesis [BR:
palz03029
]
118043942
Membrane trafficking [BR:
palz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118043942
Atg1 complex
118043942
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118043942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118043942
NCBI-ProteinID:
XP_034907947
LinkDB
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Position
15:complement(4987409..4991657)
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AA seq
605 aa
AA seq
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MHGHSHHDSGKLEQIISHFLLKSLHIILDSRIPSLHPHNHPRDFCSISHVKKSDKWFNLA
LGDRPAALDNLSFWHRNLMDPMVIDVILVHQPSPPSSSMHNFYVDPGTSVETVLERWVVH
YESLRVMPPQTAERPASYKKTYKKSIILLRSLYSHMRLLPAYRIFRQLSSCKQTYNFDII
YKVSSFCEPFSSADEEVMKELSFVPVEALPGSLCVSVTYRSTLSDFKLEPVTTMPPKIIM
DYVGSPTTDPLRSFPSSEKGVGATSFPLRGMQPPVSSPFQRPHSWTSGYHRAAHMMNQPL
GGSPPPYRTSRMTCDFPSSPTDIYGHRAQNYRPPTPQKATCYDEYQISPPFSPSMSPSTP
THLYNGSPVLARVTSETAPVTIPLSISGTSSRYLSPNFSDSSRHSLPPLSPRSTKHDSSS
QESPSGIRSFKKSEAIRFAELNSGNVNHYSGQKLLKDSKDDSGRFSGLLSSSGSPRIGFS
RSSSRLSFQDDLEDDDFSCPFDVDDVDTSDSHASSQAAAVGKKSQDAAVGILVQMLRTAP
PLRQDPSCYSSQSMRTDVEEGIGTTSGFFMPRKTGDALEELRSYREMKDLLLSKSGTRAV
SKEEA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtcattctcaccatgattctggaaaactagaacaaatcatttcccattttcta
ttgaagagcttgcacatcattttggactccaggattccctctcttcatccccataatcac
cctcgggacttttgttccatttctcatgtgaaaaagagtgacaaatggttcaatttagct
cttggagaccgccctgctgctctagataacttgagtttttggcatagaaatctcatggat
cccatggttattgatgtaatacttgttcaccaaccgtctcctccatcttcatccatgcac
aatttttatgttgaccccgggacatctgtcgagacagttttagagaggtgggttgttcac
tatgagtccctgcgggttatgcctccccaaaccgctgaaagacctgcctcttacaagaag
acatataagaagtcaatcatactcttacgctccctttactcccacatgaggcttctccca
gcataccggatctttcgtcagctaagctcatgcaagcaaacttacaattttgatatcatt
tacaaagtttcttcattttgcgaacccttttccagtgcagatgaggaagtaatgaaggag
ctcagttttgtccctgttgaggccctgcctggcagcctttgtgtatctgtgacctatcgt
tcaacactatctgatttcaagcttgagcctgtcacaactatgccaccaaagattataatg
gactatgttggtagccctaccactgatcctcttaggtctttcccctcttcagagaaggga
gttggtgctacatcctttcccctgagaggaatgcaaccacctgtttcttctccttttcaa
cgccctcatagctggacaagcggttaccatagagcagctcatatgatgaaccaaccactt
ggtggatctccaccaccttatcgcacatctcgcatgacgtgtgattttccatcttctcct
actgatatttatggtcatagagcccaaaactatcgaccaccaactcctcaaaaggctact
tgttatgatgagtaccagatttcccctccattctcaccatcaatgtccccttctacccca
acacacctctacaatggtagtcctgtgctagctcgcgttacttcagaaactgcacccgta
actattccactttctatatcaggcacaagttctagatacctttctcctaacttttctgat
tcaagtaggcattctcttccacctttatctcccagaagcacaaaacacgattcatcatca
caggagtctccttctgggattcgatcattcaagaaatcagaagctataaggtttgccgag
ttaaactctggcaatgtaaatcattattctggtcagaagctgctcaaagatagcaaagat
gattcagggcgcttctcaggattgttatcttctagtggttctccacgcattggtttttct
agaagttcaagtagattatctttccaagatgatttagaggatgacgatttctcatgtcct
tttgacgttgatgatgttgacacatcagattcccatgccagttcccaagctgcagcagta
gggaaaaaatctcaagatgctgctgttggtatccttgttcagatgctgcggacagcacct
cccctgcgacaagatccaagttgttactcatcccaatccatgaggactgatgtagaggaa
gggataggcacaacttctgggttttttatgccaagaaaaacaggagatgctctggaagag
ctgaggagttacagagaaatgaaagacctactactctctaagagtggaactcgggcggtt
agcaaagaagaagcttaa
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