Populus alba (white poplar): 118044146
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Entry
118044146 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118044146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118044146
03036 Chromosome and associated proteins [BR:
palz03036
]
118044146
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118044146
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118044146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
NES_C_h
Motif
Other DBs
NCBI-GeneID:
118044146
NCBI-ProteinID:
XP_034908206
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Position
2:complement(18388049..18395109)
Genome browser
AA seq
1306 aa
AA seq
DB search
MFSPGIKRSSNRKAAAAPDNNSIPNRPATGTPAPWAPRLSVLARTQLTKKSEEKASDADP
IKPVYVGEFPEVVRDEQANFLRSHIPGDASISGGMDKETCLSWIICRNRLFIWSHLSSSP
SKDCVVLQLPLDCLDDGAHSNTGYHGTNWLLCFLNWDPTSRGRKKAVQSCKSAGVVLCNQ
KTRAVTYWPDIYNEGGSVPVTCMLSSDESEVTSFSVDGKSTPNRRSAINTMGSNSFNSLI
ACAHPASQHVSVALACSSNGELWRFYCTPTEIQCSKVYQDTLYLSSHGSDGSQFVRSKGY
PRSLIWRFSPHSMDDSERQFFLLTDHEIQCFSIKLHPDSNVSKMWSHEIVGTDSDLGIKK
DLAGQKRIWPLDVQVDDHGKVITVLVATFCKDRVSSSSYTQYSLLTMQYKSGVNISSDVH
ERVLEKKAPIQVIIPKARLEDEDFLFSMRLRIGGKPSGSTLIISGDGTATVSHYFRNSTR
LYQFDLPYDAGNVLDASALPSTNDGEDGAWIVLTEKAGIWAIPEKAVVLGGVEPPERSLS
RKGSSNEGSTLEERRNLMFAGNVAPRRVSSEVGDSGDRKKAVMNRISRRTSHDEESEALL
GQLFHDFLLTGQVDASYEKLQSSGAFERDGETNVFTRTSKSIIDTLAKHWTTTRGAEILA
MTMVSNQLMDKQEKHQRFLQFLALSKCHEELCTKQTGQSLLTIMEHGEKLSGMIQLRELQ
NTISQNRSHMSGSPHSSSEAQLSGALWDLIQLVGERARCNTVLLMDRDNAEVFYSKVSDL
EEVFYCLHSYLTYLINEEQPHEVQIKRACELSNAVVSIVRSAMLYRNEHHMWYPLSQGLT
SWYCQPVVRNGLWRIASFMLQLLDGTSELELSAKSDLCAHLEVLAEVLLEAYAGAVTAKV
ERGGEHKGLLDEYWNRRDSLLNSLYKQVKYFVEGGHQVLNVRTDEPDEEILRKLTSNLLS
ISKRHEGYNTMWSICCDINDSALLRNLMHESMGPKGGFSYFVFKQLYEKRQISKLLRLGE
EFQEELSIFLKHHRNLLWLHELFLHQFSSASETLHILALSQDETSISEAEETTDHVQNRF
ITTLADRKRLLNLSKIAIMAAGKTTDSETKMKRIEADLKILKLQEEILKVLPANEANQYD
GQRLFHPEELIELCLKVQNPELALRGFDVFAWTSSSFRRSHRNLLEECWKNAADQDDWGQ
LHQASKDEGWSDEETLQQLRDTVLFQASSSCYGRNAEIIDEGFDAVLPLRKENSEVSALE
DLDFSVEAILMQHKDYPDAGKLMLTAIMLGSVHDNSKVEENPSSME
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccaggaattaaaagatccagcaatcgaaaagcagcagcagcacctgacaat
aattcaatccctaatcgccctgccaccggcactcccgctccttgggctcctcgcctctca
gttctcgccagaactcaattgacgaaaaaaagtgaagaaaaagctagtgatgctgatcca
attaagcccgtgtatgttggagagtttccggaagtagttcgtgatgaacaagccaacttt
ttgcgcagccacattcctggtgatgcatctatatctggtggaatggataaggagacgtgc
ctttcctggatcatttgcagaaatagactctttatctggagtcacttatcatcttcacct
tcaaaagattgtgttgttcttcaacttcctttagattgtttagatgatggagctcatagc
aatactggctatcacggcacaaattggctgctttgttttctcaactgggatcccacatcc
aggggaaggaagaaagctgtacaaagctgcaagtctgctggtgtggtattgtgtaaccaa
aaaactcgagctgttacatactggcctgacatttacaatgaaggcggatctgttccagtt
acttgtatgttgtcttctgatgaatcggaggtgacttcattctctgttgatgggaagagc
acccctaatcggcggtctgcaattaatacaatgggatccaattctttcaactctttgatt
gcttgtgcacatccggctagccagcatgtttctgttgccttggcttgtagttccaatggt
gagctgtggcgcttttattgcacccccactgaaattcaatgcagtaaagtgtatcaggac
acattgtatttatcctctcatggcagtgatggtagtcaatttgtcaggagcaagggctat
ccaaggtcactcatctggcggttttcaccccattccatggacgattctgaacggcagttt
tttttattgactgatcatgagatacagtgtttcagtataaaacttcatcctgattcaaat
gtgtcaaagatgtggtctcatgaaattgttggcactgacagtgatttgggcattaaaaag
gatctggctggtcagaaacgcatatggcctctagatgtacaggtggatgaccatggcaaa
gtcatcacagttcttgttgccactttctgcaaggatcgtgttagcagttccagctacaca
caatattctcttctgaccatgcaatataagtcaggagtcaacatttcttctgatgtacat
gaaagggttttggagaaaaaagccccaatccaagtgataatcccaaaagcaagattagaa
gatgaagatttcttattttctatgagacttagaataggaggcaagccttcaggttcaaca
ctaataatttctggcgatggaacagcaacagtctcccattattttaggaactctacacgt
ctctatcagtttgatctaccttatgatgcaggaaatgttctagatgcttcagcccttcct
tctacaaatgacggcgaagatggtgcatggattgtattaactgagaaggctggaatatgg
gcaataccagaaaaggctgttgtgcttggtggagttgaaccacctgagagaagcttgtcg
cgcaaagggagctcaaacgaagggtctacactagaagagagaagaaacctcatgtttgca
ggcaatgttgctcctagaagggtaagttctgaagtaggggattctggtgatagaaaaaag
gctgttatgaataggatttcacggcgaacttcgcatgatgaagaatcagaggctttactt
ggtcagcttttccatgattttctgttaactgggcaagtcgatgcctcatatgaaaagctt
caaagttctggggcttttgaaagggatggagaaacaaatgttttcacccgcacaagcaaa
tcgatcattgacaccttagctaaacactggacaaccaccagaggtgctgaaattttggct
atgaccatggtatccaaccaactcatggataagcaggaaaagcatcaacgatttttacag
tttcttgctctatcaaaatgccatgaggagctatgcactaaacagacaggacagtctttg
ctaacaatcatggaacatggagaaaagctttctggaatgattcaactgagagaactgcaa
aacacaattagccagaacaggtcacatatgagcggctccccacattccagttcagaagct
caactttcaggtgctctatgggatctaattcagttagttggtgaaagagcccgctgcaat
acagttcttctcatggacagagacaatgctgaagtgttttacagtaaggtttcggatctt
gaagaagtattttattgcttgcacagctacttaacatacctaataaatgaagaacagcct
catgaggttcagatcaagagggcttgtgaactctcaaatgcagttgtgtctatagttcgt
tctgctatgctctatagaaatgagcaccatatgtggtatccactatcccagggcttaaca
tcttggtattgtcaacctgttgtgcggaatgggctgtggagaattgcttctttcatgctt
cagctgttagatggaacatctgaacttgaactttctgcaaaatcagatttatgtgctcat
ctagaagtactggctgaagttctacttgaggcatatgctggtgctgtcacagctaaagtt
gagcgaggaggagaacacaaggggctgctagatgagtattggaatagacgggattccctt
cttaactccctctacaaacaagtgaaatattttgtggaaggcgggcaccaggttttaaat
gtaagaactgatgagccagatgaggaaatccttagaaagctaacttcaaatttgttgtcc
atttcaaaaagacatgaagggtacaatactatgtggagtatatgttgtgacatcaatgat
tcagcgctgctcagaaatcttatgcacgagagcatgggaccaaagggaggtttcagttac
ttcgtttttaaacagctgtatgaaaagaggcaaatctcaaagcttctaagacttggagaa
gagttccaggaagagctatctatttttctgaagcatcaccgaaatctgctttggcttcat
gaattgtttttgcatcagttttcctcagcttctgaaactcttcatatattggccctttct
caagatgagacctcaatttcagaagctgaagagaccacagaccatgtgcaaaacagattt
ataaccacactggcagatagaaagcgtcttttgaacctctcaaagattgctatcatggca
gcaggtaagactactgactcggagacaaagatgaagcgaattgaagcagatttgaagatt
ttgaaattgcaggaagaaattctgaaagtacttcctgccaacgaagcaaatcaatacgac
ggacagaggctcttccatcctgaagaactcatagagctgtgccttaaagttcaaaaccca
gagcttgcattgcggggctttgatgtgtttgcatggactagctcctcgtttcgtaggagt
cacagaaaccttctggaggagtgctggaagaatgctgctgatcaggatgactggggtcaa
ctccatcaagcatccaaagatgaagggtggagtgacgaggaaaccctgcagcaactgaga
gatacagtgctcttccaggcatcaagcagctgttacggacgcaacgcagaaattatcgat
gaaggttttgatgctgtcctgcccttgagaaaagaaaactctgaagtttcagcattggaa
gatctggatttctctgtagaagcaatactgatgcagcacaaggattaccctgatgcagga
aagctaatgctgacagcaatcatgttaggaagtgtacatgacaattcaaaagtagaagag
aatccttcttcaatggagtaa
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