Populus alba (white poplar): 118044241
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Entry
118044241 CDS
T07314
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118044241
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
118044241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
TPR_2
TPR_14
CSN5_C
Motif
Other DBs
NCBI-GeneID:
118044241
NCBI-ProteinID:
XP_034908357
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Position
19:complement(22355883..22361678)
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AA seq
725 aa
AA seq
DB search
MEAVAEGLWGLADYAEKKGEIGKAVKCLEAICQSHASFLPIVEVKTRLRISTLLLKHSHN
VNQAKSHLERSQLLLKQIPSCFDLKFRTFSMLSQCYHLVGAIPPQKQTLLKALDLTASLP
PEVSVRLWACNFNSQLANALIIEGDYHSAFSALESGFESASQLCYPELQMFFATSVLHVH
LMQWYDDNSVQSALRRCDDLWESLGPDRREQCLGLLFYNELLHIFYQLRVCDYKNANQHV
DKLDAAMKADSQKMREAQRLTNELNALNQSLSRPDLPNRERSLLSSKQAQIQDRISSMNN
TNWSAEQPLEPAYFGNTKRPWQEKLVLAPPPIDGEWLPKSAVYALVDLMVVIFGRPRGLF
KECAKRIQSGMRAIQVELVKLGITDGVREVDLQHSAIWMAGVYLMLLMQFLENKVAVELT
RSEFVEAQEALVQMKEWFIRFPTILQACESIIEMLRGQYAHSVGCYSEAAFHYIEAAKLT
GSKSMQAMCQVYAAVSYICIGDAESSSQALDLIGPIYRMKDSFVGVREQASVLFAYGLLL
MRQDEYEEARARLAKGLQIAHNSMGNLQLIAQYLTILGHLALALHDTVQAREILRSSLTL
AKKLYDIPTQIWVLSVLTGLYKGLGEIGNEMENEEYRNKKLDDLQTKLADAHSSIHHIEL
IAKLRIEVQQFHELDIKRAMESQSMGVNLDIPESVGLSTPMPASSSSRLLDLDNLDSRRR
GKRKI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagtagcagagggactatggggattagcagattacgcggagaagaaaggagaa
ataggaaaagcagtgaaatgccttgaagccatctgtcaaagccacgcgtctttcttaccg
atcgtggaggtgaaaacccgtctccgcatctcaactctactgctgaagcactctcacaac
gtgaatcaagcaaaatcccatctggaacgctcccaacttcttctcaaacagattccttct
tgcttcgacttaaaattccgtactttcagcatgttaagtcagtgttatcatctcgttggc
gctattcctcctcaaaaacaaaccctccttaaagctctcgacctcaccgcttcccttcct
ccagaggtttcggtgaggttatgggcttgcaatttcaattctcagctggctaatgctttg
attattgaaggagattatcattctgctttctctgctttggaatctggttttgagtctgct
tctcaattatgttatcccgagttgcagatgttttttgcaacttcggtactgcacgtgcat
ctgatgcaatggtacgatgataattcggttcagtctgctcttcgtagatgcgacgacctt
tgggaatcattaggccctgatagaagggaacaatgccttggtttgcttttttacaatgag
ctacttcacatattttatcaacttcgtgtctgcgactacaagaatgccaaccagcacgtg
gacaagttggatgctgctatgaaggctgactcgcagaaaatgcgggaagcacagagacta
accaatgaactcaatgcattaaatcaaagtctttccaggcctgacttgcccaacagagag
aggtccttactgtcttcaaagcaagctcaaattcaagatcgtatctcaagtatgaacaac
acgaattggtctgctgaacaacctctggaacctgcatattttggaaatactaaacggcca
tggcaagagaagcttgtgttggcaccacctcccattgatggagaatggttgccaaaaagt
gctgtctatgctctggttgatcttatggtggtcatatttggtcgaccaagaggacttttt
aaggagtgtgcaaagcggattcaatccgggatgcgtgctattcaagtggagttggtgaag
cttggaataactgatggtgttagagaggtggatttgcagcactccgccatttggatggct
ggtgtgtatctaatgcttttaatgcagttccttgaaaacaaagttgccgtggaactcaca
agatctgaatttgttgaagcacaagaggcattggtgcaaatgaaagagtggttcattcgc
tttccaacaattttacaggcctgtgagagtataattgagatgctaagagggcagtatgct
cattctgttggctgttatagtgaagcagcttttcattacattgaagctgcaaagctaaca
gggagcaagtcaatgcaagctatgtgccaagtttatgcagctgtctcttacatctgcatt
ggtgatgctgaatcatcatcacaggcacttgatttgattggaccaatttacagaatgaag
gattcttttgtaggagttcgagagcaagcaagtgttctttttgcttatggccttttattg
atgaggcaggacgaatatgaggaagcacgagctcggctggccaagggcctgcagattgct
cataatagtatgggtaaccttcaactcattgcacagtatttgacaatccttggacatttg
gctcttgctttgcatgataccgtacaagccagagagatcttgagatcttcccttacgctg
gcaaagaagctttatgatatcccaactcagatctgggtgctgtcggttctgacaggtttg
tataaaggattaggagagattgggaatgaaatggagaatgaggaatatcgaaataaaaag
ttagatgatctgcaaacaaaacttgctgatgcacattcatccattcaccacattgaactg
attgccaagctaagaattgaagttcaacagtttcatgaacttgatatcaagcgtgctatg
gaaagccagtccatgggagtcaacctcgacattccagagtctgttggtttatcaactcca
atgccagcttcttcatcatcaaggctgctagatttggataatctggacagtcgaaggcgt
gggaagagaaaaatttag
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