Populus alba (white poplar): 118044251
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Entry
118044251 CDS
T07314
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
palz
Populus alba (white poplar)
Pathway
palz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118044251
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Motif
Pfam:
Sel1
TPR_2
Vps39_1
TPR_6
TPR_12
Motif
Other DBs
NCBI-GeneID:
118044251
NCBI-ProteinID:
XP_034908365
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Position
12:4556243..4561493
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AA seq
682 aa
AA seq
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MQRHKLTLSLLIFSLLPLSLLARPYFLILSQEDLKDIPSSPTTTSSDVDPNESPPEWDEF
GDSDSKPEHELDPGSWRPIFEPDATRSSTSASELDPEMEQYYSAVEKMFSAVSDSEVRVV
EEAVAEIEELATVKGNSHAQSVLGFLYGLGQIKERDKAKAFLYHHFAADGGSLQSKSALA
YTYYRQQMHEKAVKLYAELAEVAVNSFLISKDSPVIEPVRIHHGAEENKEALRKSRGEDD
DVFQILEYQAQKGNAGAMFKIGYFHYFGLRGLRRDHAKALAWFSKAVEKGEPRSMELLGE
IYARGAGVERNYTKALEWLTLAAKQQLYSAYNGMGYLYVKGYGVQKKNYSKAKEYFERAA
DHEDAGGHYNLGVMHLKGIGVKRDVRLACQYFIVAANAGQPKAFYQLAKMFHMGVGLKKN
LPMATALYKLVAERGPWNSLSRWALESYLKGDVGKAFLLYSRMAELGYEIAQSNAAWILD
KYAEGSMCMGESGFCTDSERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTERDYERA
AEAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDPAAKLPVTLALAS
LWIRKNHADSFMVHVIDSLPGVYPKIKAWVENIILEEGNAAILTLFACLLTVLYFRERQR
RNAAVEDGIQGQHIHHAPAALN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacacaaactaacactctctcttctaattttctctctcctcccactctctctc
ctcgcccgcccgtactttctcatcctctctcaagaagacctcaaagacatcccttcctcg
ccaaccactacctcctccgatgtggaccccaatgagtctccacccgagtgggacgagttc
ggcgactctgactccaaacccgaacacgaactcgaccctggctcctggcgcccgattttc
gaacccgacgccaccagatcctccacctctgcatcggaactcgatccggagatggagcag
tactactccgccgtggagaagatgttttcggctgtgagtgacagtgaagttagggttgtg
gaggaagcagtggcggaaattgaggaattggcgacggtgaaggggaattcacatgcccaa
tcggttttagggtttttgtatggattagggcaaattaaagagagggataaagctaaggct
tttttgtatcatcactttgcagccgatggaggcagtttgcagtctaaatcagctcttgcc
tacacgtattaccggcagcagatgcatgaaaaggcggttaaattatatgcggaattagca
gaagtagcagtaaatagttttttgatttcgaaggattctccggtgattgaaccggttagg
atacatcatggggccgaggagaataaagaggctttgaggaaatcacgaggggaggatgac
gatgtgttccagattttggaatatcaagctcaaaaagggaatgcgggagcaatgtttaaa
attgggtattttcactactttggattgagaggattgaggcgtgatcatgccaaagccttg
gcatggttttcaaaggctgtagagaaaggggaacccaggtcaatggaacttcttggtgaa
atatatgcccggggagctggagttgagaggaactatactaaagcgcttgaatggcttaca
cttgctgcaaaacagcagctttattcggcttataatggcatggggtatttgtatgtcaag
ggttatggagtgcaaaagaagaattacagtaaagctaaagaatactttgagagggctgct
gaccatgaagatgctggtgggcactataaccttggagtaatgcatcttaaagggattggc
gtaaagagagatgtaaggctggcatgccagtattttatagtagctgctaacgcaggtcaa
ccaaaggcattttaccagctggcaaagatgtttcatatgggggtggggcttaaaaagaat
cttcctatggccactgcgttatacaaactagtagcagaacggggcccgtggaactccttg
tctagatgggcattggagtcatacctaaaaggtgatgtgggcaaagcattcctgttgtat
tcaaggatggctgagctgggctatgaaattgcacaaagtaatgctgcatggattcttgac
aaatatgcagagggtagcatgtgtatgggggaatctgggttttgtacagactcggaaaga
caccagcgtgcccattctttgtggtggcaagcttcagaacagggcaatgaacatgctgct
ttgcttattggtgatgcatattactatggtaggggtactgagagggattatgaacgagcg
gcagaggcttacatgcatgccaaatcgcaatctaatgcgcaagctatgttcaatcttggt
tacatgcatgaacatggtcaaggacttccacttgaccttcatcttgccaagcgttactat
gaccaagctcttgagatcgatcctgcagcaaagttacctgtcaccctagcccttgcaagc
ttgtggataagaaagaaccatgcagacagtttcatggtacatgtaattgattcattgcct
ggagtctatccaaaaatcaaagcatgggtggagaatattatcctggaagaaggaaatgca
gcaatacttactctttttgcctgtctgcttacggttctctattttcgtgaacggcaacga
aggaatgctgctgttgaggatggcatacaaggccaacatatccatcatgcacctgccgca
ctcaattag
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