Populus alba (white poplar): 118044271
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Entry
118044271 CDS
T07314
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118044271
Transcription machinery [BR:
palz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
118044271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
118044271
NCBI-ProteinID:
XP_034908398
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Position
12:3272676..3276563
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AA seq
512 aa
AA seq
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MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT
KGKKRLGKSKKSSNRLKAVRTEVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGV
IRRGRQRKRKISEGDKEAEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVTSAGKR
KDRKNENEKIDELVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKE
HLQENLGREPTDVELAKATNMDVLQVRKKIAVGRAARNKLIKHNLRLVLFVIKKYFQDIA
KGTKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHSIIRSMTLSSFTRVSFGLE
SIRSEIQKAKLELWFQLKRQPLENEIIEKVGISPERYHEVTRASKPVLSLHSRHKTTQEE
FIGGIADVDGGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNL
NISREMVRKHEVKALMKLKHPTRVDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaagtgtttcgagctcagcttctcggacaccactaggattgagcacaaag
ttttcaacttacggatctacagcaaaaaggcctttgattgtagcatttaaagccgacaaa
tccaacaacacatctttggttgcaccacatgaacaaattccattgcctgtagaaacaacg
aaggggaagaagagacttggaaaaagcaaaaaatcttctaatagattaaaagctgtccgt
actgaagtttctccgtgtacattgttagtggattacaatgaagctgctgcgaaacttgaa
aacatatacaagcttagccctggaactgatacttctgatgtggaagacgcaagtggtgtg
attaggagaggtaggcaaaggaaaaggaaaattagtgaaggtgacaaggaagccgaggat
agaactagtaaaatcattgttaggaaccgggcaaagaaggctaaacgattgagccttgag
aaaaggatttctctgaggatcaagaatgaagaaaaattggtgacttcagctgggaagaga
aaagatcgaaaaaatgaaaatgaaaagattgatgagcttgtgagggagtattctgcttca
actgatttggtcagcttggactggaaaaaaatgaagatacctccggtccttacttcatca
gagcatgtctggttatttaagttgatgcagcctatgaaagcactccttcaagtgaaagag
catctgcaagaaaatctggggagagaaccaactgacgttgaattagctaaagcaacaaat
atggatgtgctccaagtaagaaagaaaatagcagttggtcgagctgcaaggaacaagctc
attaagcacaatcttcggcttgtattgtttgtgatcaaaaaatattttcaagacatcgca
aaagggacaaaatttcaagatctttgtcaggcgggagtgaagggacttattacagcaatt
gatcgctttgaacccaaaaggagattccggctctccacttatgggctattttggattaga
cattccatcatacgatcaatgacactctcaagctttacacgcgtttcgtttggcctggaa
tcgattaggtctgaaatccagaaagcaaaacttgaattgtggtttcaacttaaaagacaa
ccattggagaatgagattattgaaaaagttgggatctcccctgagaggtaccatgaagtt
acgagggcctcaaaacccgttttgtctctccattcaagacacaaaacaacgcaggaagag
tttattggtggaattgctgatgttgatggaggtgatgaccggaggcagtcagctcttctc
aggcttgcacttgatgatgtgcttgattctctaaaaccaaaggagagcttggtggtccga
cagagatacgggcttgatggtaaaggagacagaacattaggagagattgctgggaactta
aatatctcaagagaaatggtcaggaagcacgaagtaaaagcactcatgaagctcaaacat
ccaactagagtggattatcttcgccgctatgttgtctga
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