Populus alba (white poplar): 118044377
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Entry
118044377 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118044377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118044377
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118044377
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
UBA_At5g58720
TPR_2
Motif
Other DBs
NCBI-GeneID:
118044377
NCBI-ProteinID:
XP_034908535
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Position
12:complement(3556632..3568667)
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AA seq
863 aa
AA seq
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MGSEQDMSNWTDLLHSSTKLVEQAAPSAQFPPLQRNLDQLEALSKKLKAKTIRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNVRSFNDYMMKVLEEDWQKERRDFLQSLSRISSLPKTNLVDTSTGVTRSRQIASLAS
SPHVSSGSSGMENLPLANKSSVEKKASAYAEAVKNLNRAREHGSQFKPATAFKGAYESLG
AEVSGGKSVNMQKIWHLVQTLVGENTTMKQSLSRKMSLVIGARRHLEWGHEKYIMDTIQN
HPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDTHRQPPVDTTWQQIYFCLRTGYY
EEARTVALSSRASLQFAPMLMEWINSGGMVPMDIAAAASEECEKMLRMGDRVGRAAYDKK
KLLLYAVVSGCRRQIDHLLRDLPTLFNTIEDFLWFKLSAVRDYPAGTSTLVLNESLVPYS
LEDLQAYLNKFEPSYYTKNGKDPLVYPYILLLSVQMLPAILYLSREAADEGYDIDAVHIS
IALADHGVLTEGGGAGQKLGVMDAYAEVSSIIRQYGSVYLHHGNLSMALEYYAQAAATVG
GGETSWTGRCNIDQQRQRSLMLKQLLTELLLRDGGIYFLLGPRGAGEEGELARFLIDFQA
RQQFLLEAARKCQEAGLDEKSIEIQKRVGAFAMALDTINKSLSEAICALSRGRLDGESRT
AGLINSGNEILVTFKYYPDFSFQERDLVLEQETVLRQLEAILSVLKLARLGHFLDALREL
AKLPFLPLDPRVPDITVDVLQNLSPRVQDCVPDLLKVALTCLDNVTDSDGSLRAMKAKIT
QFIANNMSRNWPRDLYEKVARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcgaacaggacatgagtaactggactgatctgcttcactcctctactaagctt
gtcgaacaagccgctccttctgctcagttccctcctcttcagagaaacttagatcaatta
gaagcattatcaaagaaactcaaggcgaaaaccataagaactgaggctccttcgcaatct
attgccgctacaaggcttcttgcacgtgaagggataaatgcagagcagcttgctcgagat
cttaagtcttttgaattgaagacaacatttgaggatgtgtttcctgccgaggcaacaagt
gttgaggagtatctacaacaggttcatgaaatggcaatggtatcagccattcaggaagct
cagaaggataacgtaagaagttttaatgattacatgatgaaagttttggaggaggattgg
caaaaggaaagacgtgactttcttcagagcttgagccgaatttcatcattacccaagact
aacttagttgatacaagcactggggttactcgttctcgtcaaatagcttctctggcttcc
agccctcatgtttcttctggctcatctggcatggaaaatttacctttagctaacaaatcc
tctgtggagaaaaaagcttcagcatatgctgaggctgtgaagaatctgaaccgtgcacga
gagcatggctcacagtttaaacctgcaacagctttcaagggtgcttatgaaagcttaggt
gctgaagtatcaggtggaaaatctgttaacatgcaaaagatatggcatcttgttcagact
ttggtgggtgaaaatacaaccatgaaacagagtctttcaaggaaaatgtcgttagtgatt
ggtgcaaggcgccatcttgaatggggccatgaaaaatacatcatggatacaatacaaaat
catcctgctcaggctgctcttggtggagctgttgggaatttacaaagagttcgtgcattt
ctccggattcgattgagggattatggagttctggattttgatgctggtgatactcatagg
cagcctcctgttgataccacttggcagcagatctatttttgcttgagaactgggtactat
gaggaagcgagaactgttgccctgtcttcccgtgcttcactccaatttgctccaatgctc
atggagtggatcaactctggaggtatggtgcctatggacattgcagctgctgcttcagaa
gaatgtgagaaaatgttaagaatgggtgatcgagtgggtcgagctgcatatgacaagaaa
aagttgttgctctatgctgtagtatctggttgccgcaggcagattgaccacctgttgaga
gatcttccaacccttttcaatactatagaggattttctgtggttcaaattatcagctgta
cgagattaccctgctgggacctcgactctggtcctgaatgaaagcttggtaccatacagt
ttggaggatttgcaggcatacttgaataaatttgagccatcatattacacaaaaaatggg
aaagaccctctcgtgtacccttatatattacttttaagtgtccagatgctaccagctatc
ttatatctgtctagggaagctgcagatgaaggatatgatattgatgcagtccatatatca
attgcactagcagaccatggggttcttactgaaggtggtggagctgggcaaaaactcggg
gtaatggatgcttatgcagaggtctctagcataattaggcagtatggatctgtatattta
catcatggaaatctctcaatggcactagagtattatgcccaagctgcagccacagtaggt
ggtggagaaacatcatggactgggagatgtaatattgatcagcagaggcagagaagcttg
atgttgaagcagctcctcactgagcttctgctaagggatggtggtatttattttcttctg
ggtccaagaggtgctggagaagaaggtgaattggcacgatttttgatcgatttccaagca
agacaacaatttctacttgaagctgctcgcaagtgtcaagaggctggactagatgaaaag
tctatagaaattcagaagagagttggggcatttgccatggctttagatacaatcaacaag
tccctgtcagaagcaatttgcgcgctatcacgtggtagattggatggtgagagccgaact
gctggtctcattaattctggcaatgagattctcgtgacctttaagtattatcccgatttc
agttttcaagaaagagaccttgtcctagagcaagaaaccgtgttgagacagcttgaggcg
atattatctgttctcaagttggcaagactgggtcattttcttgatgctttaagggagctt
gccaaacttccttttcttccattggatccacgagtgccagatatcactgttgatgttctt
cagaatttatcccctcgtgttcaggattgtgtgccagaccttttgaaggttgctttaaca
tgtttggataatgtgacagattctgatggatcacttcgtgccatgaaagcaaagattaca
cagtttattgcaaacaatatgagtcggaactggcctcgggatttgtacgagaaggttgct
cgaagtttgtga
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