Populus alba (white poplar): 118044418
Help
Entry
118044418 CDS
T07314
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
palz
Populus alba (white poplar)
Pathway
palz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
118044418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118044418
Transcription factors [BR:
palz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
118044418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118044418
NCBI-ProteinID:
XP_034908578
LinkDB
All DBs
Position
2:10445444..10454267
Genome browser
AA seq
768 aa
AA seq
DB search
MDTYSSGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAVAKGVPIGQALEIDIPPPRPKRKPSNPYPRKTGVGPPASQAGAK
DGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKENQDDNCSEVFTLLQEAHCSSV
ASVNKNCVPALEVLKKTSSFREFVTSPKKGNHDACNESFITVEHEANQKLDSSDANQTVL
DNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMQAMQNYPRHVPVHVLDGSLGTC
METPSDLSFQDSMFHPVGDIPACPILYSHPAGSTTTDHPTNLPRSSMHQSFPFFPPPFTP
THHNQDDYRSFLQISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNVVSSADSPACAQE
GFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICAPLHTAFACPPASATAIQSADTD
QVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQKSASKPPTLSSSDSEESGGTKLNTG
PKVTDHELNSKAPEVQDSGKTKSRKQVDRSSCGSNTPSSSEIETDALAKTEKGKEEPKEA
EANHPASELNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTREILPQSFSPPHDLKSKMHQ
KEDTEEKKNPDEKDGDASLLDLNSKTWGYCSGYQEGEKNAVVPRCVNDGEEGLLTIGLGH
GNLKAHLTGFKPYKRCSLEAKESRIGTAGGQGEEKGPKRLRLEREASV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatacatactcctctggagaagacttggttattaagacgaggaaaccatatacaatt
accaagcaacgagaaagatggacagaggaggagcataacaggttcctagaggccttgaag
ctctatggacgagcttggcagcgaatcgaagaacatattggtacaaagactgccgtgcaa
atcagaagtcatgcacagaagttcttttcaaagttggagaaggaggctgttgctaaagga
gttccgataggacaagcacttgaaatagacattccaccaccacgtcccaaaaggaaacca
agcaatccttatcctcgaaagacaggtgtgggtcctcccgcatcacaggcaggagcaaag
gatggaaagcttttaacttcaacttcttctccacattgtaggaaagttttagatttggag
aaagaaccacgtcctgagaaacctaatggagatgagaggccaaccaatgctaaggaaaat
caggatgacaattgctcagaagtatttacccttctccaagaagctcattgttcctctgta
gcttcagtcaacaagaattgtgtaccagcactagaggttctcaaaaagactagctctttc
agggagtttgtaacttcaccgaagaagggaaatcatgatgcatgcaatgaatcctttatc
actgtcgagcatgaagcaaatcaaaagttggacagctctgatgccaatcagacagttttg
gataatggcactgttaaagcttcaaaatcagaaaattcttgctctttgcatgagatattg
tttcagcaaaagaaatcagatgattttattggatcattgccaacagatgagatgcaagcc
atgcagaactatccaaggcatgtccctgtgcacgttctagatgggagcctgggaacatgt
atggaaactccctcggatttgtcatttcaggattccatgtttcatccagtaggagatatt
ccagcgtgtcctattttatactcacatcctgctggatccactaccactgatcatccaact
aatttgccaagatcctctatgcatcaatcatttccattttttcctcctccatttacccca
actcatcataatcaagatgactacagatcatttctccaaatatcctccacattttcgagt
cccgttgtatctactctgctacaaaacccggcagcccatgctgcagcaagctttgcagct
accttttggccctacggaaatgtggtgagttctgcagattctccagcatgtgcccaagaa
ggtttccaatcggggcaaataaactctgctcccagtatggcagctattgctgctgctaca
gtggcagcagcaactgcatggtgggcagcacatggactacttcccatatgtgctcctctt
cacactgcctttgcctgccctcctgcttctgcaactgcaattcagtctgcggatactgat
caagttcctccagccaagccagaaaggaaggaaacaactcctgataatcctcctttgcag
ggtcaaatacaggacctggagcactctgaagctgtgcaagctcaaaaatctgcatcaaaa
ccaccaacgttgtcatcatcagattctgaagagagtggaggcacaaagctaaacactgga
ccaaaagttactgatcacgagttaaattcaaaagctcctgaggtccaggattcaggcaaa
acaaagagcagaaaacaggttgaccgttcttcatgtggttcaaatacaccatctagcagt
gaaattgagacagatgcattagcaaagactgagaaaggcaaggaagagccaaaagaagct
gaagcaaatcatccagcctctgagttgaactgtcgccgcagcagaagtagcagcagcatg
agtgattcgtggaaagaggtctccgaagaggggcggctggcatttcaagcactattcacc
agagagatattgccccagagcttctcacctccacatgatctgaagagtaagatgcaccag
aaggaagatactgaagaaaagaaaaatccagatgagaaagatggagatgcgtcactgtta
gatctcaatagcaaaacatggggttactgttctggctatcaagaaggggagaaaaatgct
gtagtgcctagatgtgtaaacgacggggaggaagggctgctgactattggacttggacat
ggaaatctgaaggctcatcttaccggatttaaaccttacaaaaggtgttcactggaagcc
aaagaaagcaggataggaaccgctggtggccagggcgaggagaaaggccccaagaggtta
cgtttggaaagggaagcttcagtttga
DBGET
integrated database retrieval system
