Populus alba (white poplar): 118044753
Help
Entry
118044753 CDS
T07314
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118044753
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118044753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118044753
NCBI-ProteinID:
XP_034909100
LinkDB
All DBs
Position
12:complement(11325148..11327083)
Genome browser
AA seq
403 aa
AA seq
DB search
MANPSLCLLFLLSLLTPALVSSSPVQVPELVVQEVHRAINASRRKLGYLSCGTGNPIDDC
WRCDPNWEKNRQRLADCAIGFGKNAIGGRNGKIYVVTDSGNDDPVNPKPGTLRHAVIQEE
PLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK
RGGNAMVRDSPSHFGWRTASDGDGVSIFGGSHIWVDHNSLSNCDDGLVDAIHGSSAITIS
NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSANPTINSQGNRFVAPDIRFSKEVTKHEDAPESEWKNWNWRSEGDLLLNGAFF
VASGAGASSSYARASSLGARPSSLVGPITMGAGALNCKKGGRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccttctctctgtctcctcttcctcctctctctcctgaccccagccctcgtc
tcctcttccccggttcaggtcccagaacttgtagtacaagaagtacatagggccatcaat
gcctctaggaggaagttgggatatctctcttgtggaaccggcaaccccattgatgactgc
tggagatgcgatcccaattgggagaagaaccgccagaggctagctgattgtgcaattggg
tttggtaagaatgccattggtggaagaaatggtaagatttatgtggtcacagattccggt
aacgatgatcccgtgaaccctaagccggggactctcaggcatgctgtcattcaagaagag
ccattgtggataatttttgctcgtgacatgacaattcaattgaaggaagaactgatcatg
aactcgttcaagactatcgatggtagaggtgcaagtgtccatatcgccggtggcccatgc
attactatacagtatgtgaccaacattattatacatggactaaacatacacgattgcaag
agaggagggaatgctatggtgagggactccccaagccactttggatggaggactgcatca
gatggtgatggtgtgtccatctttggtggttctcacatctgggtggaccataattcattg
tcaaattgtgacgatggactcgttgatgccatccatgggtcctcagccatcaccatttcg
aacaattacatgacccaccatgataaagtcatgcttctggggcatagtgattcctacact
caagacaagaacatgcaagtcaccatagccttcaatcactttggagagggtcttgtccag
agaatgccaagatgtagacatggatatttccatgtggtcaacaatgactacacccattgg
gaaatgtacgccattggagggagtgctaacccaaccatcaacagccaaggcaacagattt
gtagcacctgacatcaggttcagtaaagaggtaacaaaacatgaagatgcaccagagagt
gaatggaagaattggaattggaggtctgaaggagatctactgttgaatggagcgtttttc
gtagcatctggcgcaggcgcttcatcaagctatgctagggcatcaagcttgggtgcaaga
ccatcttcacttgtcggcccaatcacgatgggggcaggtgcacttaactgcaagaagggg
ggtcgttgctag
DBGET
integrated database retrieval system
