Populus alba (white poplar): 118044817
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Entry
118044817 CDS
T07314
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118044817
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118044817
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118044817
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
nSTAND3
PhoH
Motif
Other DBs
NCBI-GeneID:
118044817
NCBI-ProteinID:
XP_034909196
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All DBs
Position
10:5786809..5793241
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AA seq
1175 aa
AA seq
DB search
MNNTLSILSSPYISKFNPSLFPPLPQTLGFYCLQKPKPKPKPRPFNSFRLLSLSNSPNSF
IPAESQLSDAENDEEEEYEDDEDEDEEEDEAADEYDDISEALEEEAETEISVHASSSDVS
NWRKESKWQRVEKLCNEVKEFGNEIIDANELASIYDFRIDKFQRLAIEAFLKGSSVVVSA
PTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFRDFRETFGDENVGLLTGDSAIN
KDAQVLIMTTEILRNMLYQSIGMVSSGSGLFHVDVIVLDEVHFLSDISRGTVWEEIIIYC
PKEVQLICLSATVKNPDELSGWIREVHGETELVTSSRRPVPLTWHFSTRHSLYPLLDEKR
KHMNRKLSLNYLQLSASRVKSYKDDGSRRRNSRKRGSNMGFDSIGNMSEEPLSKNDISRI
RRSQVPQVVDTLAQLKARDMLPAIWFIFNRRGCDAAVQYLEGCRLLDECEASEVELALKR
FSVQNPDAVRETAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLIKVVFATETLAAGINM
PARTAVISSLSRRSSSGRIPLSPNELLQMAGRAGRRGIDERGHVVLVQASNEGAEECCKL
LFAGLEPLVSQFTASYGMVLNLLAGAKITRRSNESNEMKVLQAGRTLKEARKLVEKSFGT
YIGSNVMLASKEELAKIQKEIEMLTSETSDDAIDRKSRKILSDGAYKEIAILQEQLREEK
RLRTELRRKMETKRLNALKILLKELGNDRLPFLCLKYKDSEGVEHSVPAVYLGDADSFDG
SKFKNMVSDIDSLAQTVAPIESNVSEVETHKDVEPSYHVALGSDNSWYLFTEKWIKTVYR
TGLPNVALSLGDDLPHEVMWMLLDREEKQWEKLAESELGGLWYMEGSLETWSWSLNVPVL
NSLSEIDEVLHMSQAYHDAVESYKDQRNKVARLKKTIARTEGFKEYKRILHWKNFTEDKI
KRLKMRSNRLSERLQEIEPSGWKEFLKISNVVHESRALDINTQVIFPLGETAAAIRGENE
LWLAMVLRSRILLDLKPGQLAAVCASVVSEGIKVRAWENNNYIYEPSSAVINVINILNEQ
RSNLSKLQEKHGVEITCCLDSQFSGMVEAWAAGLTWKEMMMDCAMDDGDLARLLRRTIDI
LAQIPKLPDIDPVLQSNAKTASSIMDRPPISELTG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacactctctctatcctttcctctccatacatttccaaattcaacccctccctg
ttccctcctcttcctcaaaccctaggattctactgccttcaaaaacccaaacccaaaccc
aaaccgagaccattcaattcatttcgactcctctccttgtccaactccccaaactctttc
attccggccgagtcgcaactctccgatgctgaaaacgacgaagaagaagagtacgaagac
gacgaagacgaagacgaagaggaagacgaagctgctgatgaatacgacgatatttcggag
gcactcgaagaagaagccgaaaccgaaatatcggtccatgcgagtagtagtgacgtatca
aattggcgcaaggaatccaagtggcagagagttgaaaagctctgtaacgaagtcaaagag
tttggaaatgaaattattgacgctaatgaacttgcttccatttacgatttccgcatcgac
aaatttcagcggttggcgatagaggcgtttttgaagggatcatcggtagtggtatcggca
ccaacaagcagtggaaagacattgatagctgaagctgcagcagttgctactgttgctaga
ggaaggaggattttctacaccactcctcttaaagctttatccaaccagaaatttcgtgat
tttcgggaaacgtttggggatgagaatgttggtcttctcacaggagattctgccatcaat
aaagatgcccaagttttgattatgacaacagagattttgcgaaacatgttgtatcaaagc
attgggatggtttcttctggtagtggacttttccatgttgatgtgattgttttggatgaa
gttcattttctaagtgatatatctcgtggtactgtatgggaggagataattatttattgc
ccgaaagaagttcaactgatatgtttatcagcaacagtcaagaatccagatgagctgtct
ggatggattcgtgaggttcatggtgaaactgaactggtgacatcatcaaggcgtccagtt
ccattgacttggcacttctctaccaggcattctttgtatcctcttcttgatgagaaaaga
aagcacatgaataggaagctgtcgctcaattatctacaactttctgcttcaagagttaaa
tcttacaaggatgatgggtcgagaagaaggaattcaagaaaacggggaagcaacatgggc
tttgatagtattggtaacatgtctgaagaacctctttcaaagaatgatataagcaggata
cgccgttcacaggtgcctcaagttgttgatacactagcacagcttaaggcaagggatatg
ctgcctgcaatttggtttatttttaaccgaagaggatgtgatgcggctgtgcagtacctt
gaaggttgcaggctcttagatgagtgtgaggcaagtgaggttgaactggctttgaagagg
ttcagtgttcagaatcccgatgctgtcagggagactgctgtcaaaggacttctaagaggg
gttgctgcgcatcatgcaggatgtctccctctatggaaatcttttattgaggaactgttc
cagagaggacttattaaagttgtctttgctacagaaacactagctgctggaatcaacatg
cctgctaggacagctgttatctcgtctctcagcaggaggagtagtagtggacgtatccca
ttaagcccaaacgagcttcttcaaatggccgggcgagctggtcgtagaggcattgatgaa
aggggccatgttgtgctggttcaggcttccaatgaaggtgcggaagagtgctgtaagctt
ctatttgctggactagaacctcttgtatcacagtttactgcttcctatgggatggtgctg
aatcttcttgctggtgcaaaaattactcgtagatcaaatgaatcaaatgaaatgaaggtt
ctccaggcagggagaactttgaaagaagctaggaaactagttgagaaaagttttggaaca
tatattggcagcaatgtgatgcttgcttcaaaagaggagctagctaaaatacagaaagag
attgaaatgctgacctcagaaaccagtgatgatgctatagatagaaagagcaggaaaatc
ctatctgatggggcatacaaggagattgcaattttacaagaacaattgagggaagagaaa
cgcctgcggactgaattacgcagaaagatggaaacgaagagattaaatgccctgaaaatt
ttattgaaagagttaggaaatgatcgtttaccctttttgtgcttgaaatacaaagattct
gaaggagtggaacattcagtgcctgctgtttatttgggggatgctgattcatttgatggt
tcaaaatttaaaaacatggtttctgacattgattcattagcacagactgttgcacccatt
gagtccaatgtaagtgaagttgaaactcataaagatgttgagccatcctatcatgtagct
cttggttcagataactcttggtatctgtttacagaaaaatggatcaaaactgtttatagg
acaggccttcctaatgttgccttgtctctaggggatgatttgccacatgaagttatgtgg
atgcttcttgatagggaggagaagcagtgggaaaagcttgctgaatctgaacttggtggt
ttatggtacatggaaggatctctcgagacatggtcgtggagcttaaatgtgcctgtttta
aatagtctctctgagattgatgaggtgttacacatgtcacaagcttaccatgatgcagta
gaaagttacaaggatcaaagaaacaaagttgcacgtttgaaaaaaacgatagcacgtact
gaaggcttcaaagaatataagaggatcctacactggaagaattttacagaggataagatt
aaacgcctcaagatgagatcaaaccgtttgagcgaacggctgcaggaaattgaaccatct
ggttggaaagaattcttaaagatcagcaatgttgtacatgaaagcagggccttggatatc
aacacacaagtaatatttcctcttggtgaaactgcagctgcgattcgaggagaaaatgaa
ctgtggcttgcaatggttcttcgaagtagaatcctcttggatttgaaacctggacaactt
gcagctgtctgcgcaagtgtagtttctgaagggatcaaagttcgtgcctgggaaaataac
aactacatctacgaaccttcttccgcagtaatcaatgttatcaacatcttaaatgagcag
agaagtaacctttcgaagcttcaagaaaaacacggggtagagataacctgttgtttggat
agccaattttcaggtatggttgaagcctgggcggcagggctcacttggaaggagatgatg
atggattgtgcaatggatgatggggatttagctcgcctcctgcgacgaacaattgatata
ttggctcagattcctaaattacctgatattgacccagttttgcaaagcaatgcaaagaca
gcatccagcatcatggaccgtccaccaataagtgaactgactggatag
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