Populus alba (white poplar): 118045067
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Entry
118045067 CDS
T07314
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118045067
03036 Chromosome and associated proteins [BR:
palz03036
]
118045067
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118045067
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118045067
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
118045067
microRNA pathway
RISC loading complex
118045067
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
118045067
NCBI-ProteinID:
XP_034909468
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Position
8:423701..431303
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AA seq
913 aa
AA seq
DB search
MESSDSRKDLPPPPAIIPADVVKTELGPTYEQTKKAATPRRVPMARRGYGAKGQRIQLLT
NHFKVTVPKSNDHFYQYSVALFYEDGHPTDGRGIGRKVMDKVQETYDTELEGKQLAYDGE
KTLFTIGSLPHNKLEFTVVLEDVSLTRGGDNDSSRGNGSPSESDQKRRKRPYHSKTIKVQ
ISYATKIPVQAIAAVLQGQESEHFQEAVRVLDIVLRQNAARQGCLLVRQSFFHNNPRNFV
DLGGGVMGCRGFHSSFRAAQDGLSLNIDVSTTMIVKPGPVVDFLIMNQNVRDPYHIDWTK
AKRVLKNLRIKTNHSNTEYKITGLTEKSCREQTFSLNQRSGRDGDGEVPTIEVTVYDYFV
NHRNMRLQYSADFPCINVGKPKRPSYFPLELCNLVSLQRYTKALSNLQRASLVEKSRQKP
QERMRSLTDALRSSNYDADPMLRSSGISISAQFTQVEGRVLSAPRLKVGNGEDFFPRNGR
WNFNNKKLVDPVKIEKWAIVNFSARCDIRYLCNNLIKCGDMKGISISNPFEVFEESPQFR
RESAPVRVERMFEAIKSKLPGPPQFLLCILPERKNSDIYGPWKRKNLSDVGIVTQCIAPT
KVNDQYLTNVLLKINAKLGGMNSLLSIEHAPSIPLVSKLPTLILGMDVSHGSPGHSDVPS
IAAVVSSRHWPLISRYRASVRTQSQKVEMIANLFKPVAGTREDQGIIRESLLDFYSSSGK
RKPDQIIIFRDGVSESQFIQVLNIELEQIIEACKFLDENWCPKFMVIVAQKNHHTKFFQS
GSPDNVPPGTVIDSKVCHPRNNDFYMCAHAGMIGTTRPTHYHVLHDELGFSADDLQELVH
SLSYVYQRSTTAISVVAPICYAHLAASQMTQFIKFDDLSDTSSSHGGVTVPGAVPVPELP
RLHDNVSSSMFFC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcagattcacggaaagatttgccaccacctccggctataattcctgctgac
gtggtgaaaacagaattgggtccaacttatgaacaaacaaagaaagcagcaaccccaaga
cgagttcccatggctcgccgtggctacggagctaaaggacagagaatacaactactaacc
aaccatttcaaagtgacagtgcccaagtcaaatgaccacttctaccaatacagtgttgct
ctattttatgaagatggccacccgaccgatggaaggggaatcggaagaaaggttatggac
aaagtccaggagacctatgatactgagctggaaggtaagcagcttgcttatgacggggag
aagaccctgtttacgattggttctcttccacacaacaagctggaattcactgttgtgttg
gaggatgtctccttaaccagaggtggagataacgacagttccaggggtaatggcagcccc
agtgaaagtgatcaaaagcgaaggaagcggccctatcactccaaaacgattaaagtacaa
atcagctacgcaactaaaattccagttcaagcaattgcagcagttctgcagggtcaagaa
tccgagcattttcaagaagctgtcagagttctagacattgtgctaagacagaatgcagca
aggcagggttgcctgttggtgcgacagtcgtttttccataataatccaagaaacttcgtt
gacttgggaggtggtgtcatgggatgccgtggttttcattcaagttttcgagctgcccaa
gatggcctatccctgaatattgatgtatcgaccaccatgatagttaaacctggaccagta
gtggacttcctaatcatgaatcagaatgttcgagatccttatcatattgactggacaaag
gctaagagggtgcttaaaaatttgaggattaaaactaatcactccaacactgagtacaaa
atcactggattgactgaaaaatcctgcagagagcaaactttctcgctaaaccaaagaagt
ggacgggacggggatggtgaagtgccaactattgaggttacggtttatgattattttgtc
aatcatcgcaacatgcgattgcagtattcagctgatttcccgtgcattaatgttgggaaa
ccaaagcgcccatcgtattttcctcttgagctgtgcaatctggtttcgttacaacgctac
accaaagcgttgtccaacctgcaaagggcttcccttgtggagaaatcacggcagaagccc
caagagcggatgagatctttgactgatgctttgagaagcagcaattatgatgctgatcca
atgcttcgttcttccggaatttcaattagtgctcagtttactcaagttgaaggtcgtgtt
ttatctgctcccaggttaaaagtgggaaatggagaggacttcttccctcgaaatgggaga
tggaatttcaacaacaagaaactagtggatccagtgaagattgaaaaatgggctatagta
aacttctctgcacgttgtgacatacgttatctgtgtaataacttgataaagtgtggagac
atgaaaggcattagcataagtaatccatttgaggtatttgaagagagtccccagtttagg
cgagaatctgctcctgtaagagtggagagaatgtttgaggccattaagtctaagcttcca
gggccaccacaatttctgttgtgtattcttccagagaggaagaactctgacatttatggt
ccatggaaaaggaaaaatctttctgatgtagggatcgtcacacagtgcattgcacctact
aaggtgaatgatcagtacctgacaaatgtgctactgaaaatcaatgccaagcttggtgga
atgaattccttgttatcaattgagcatgctccttctatacctttggtctctaagcttccc
accttaatacttgggatggatgtatcacatggctctcctggtcattctgatgtgccatct
attgctgcggtggtaagttccaggcactggccattgatttctcgctacagagcttctgtt
cgcacccagtcacagaaggttgaaatgattgcaaatctattcaagcctgttgctggtact
cgtgaggatcagggcattatcagggagtcacttctggacttctactcaagctcaggaaaa
agaaagcctgatcagataattattttcagggatggagtgagcgagtcacagttcatccaa
gttctaaacattgaacttgaacaaattattgaggcctgcaagttcttggatgagaactgg
tgcccgaaattcatggtgattgttgcccagaaaaatcaccataccaagttcttccagtcg
ggatcacctgataatgttccacctggtactgtcattgacagcaaggtttgccatcccaga
aacaatgacttctacatgtgtgctcatgctgggatgattggaacgactcggccaactcat
taccatgttctccatgatgagcttggtttttctgcagatgatttacaagagcttgtgcac
tccttgtcatatgtgtatcagaggagcaccactgccatatctgtagttgctccgatttgc
tatgcccacttagctgcaagccagatgactcagtttatcaagttcgatgatttgtcagat
acatcttctagccatggtggggttactgttccaggtgctgttccagttccagaattacct
cgtctgcatgataacgtcagcagttcgatgttcttctgctaa
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