Populus alba (white poplar): 118045230
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Entry
118045230 CDS
T07314
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118045230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118045230
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118045230
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118045230
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118045230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
Cas_Cas4
PDDEXK_1
UvrD-helicase
nSTAND3
AAA_18
Helicase_RecD
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
118045230
NCBI-ProteinID:
XP_034909703
LinkDB
All DBs
Position
14:complement(17941981..17954726)
Genome browser
AA seq
1346 aa
AA seq
DB search
MPPKKKSKSSSSSTSSAKKNHQNSQQQQQQQPSKFGIQHFFNLHTQNALSLSQNPQPPPT
PIPQTLSQNPIISPNSLNPKFAPPSDSHHLDADDNVMDVSPEITKSVSLQRFKFSPGMLI
KQSQDDGGDEVTWKISPVSERLQAVSKQMPQLIQLLAESSKLNSFSIRPCSSLNDEISSG
TAGKVDKQLPSPPWKGADRSLVPASRVGLKRINPRQDVNLTDVNCSLAGRQSPFRTPPSL
SYCHEKLSNVSECNGASDQLDQRQHKKALLELLDQVENAISVEDSEPSAVNSSKTQDVNG
YDMPCNAGSLVKEAAIDPPESVAVPLSNYNFLVLEVSEKHRLTDSSGAQCPYKVLRLLNE
QSGEERTVYLQEEWFYSVIAPGDTVNVIGEFDDQGKCDVDRDNNLLIVHPEILVSGTRVA
ASFSCPRRTVLDERLKCSEHSTAALIGTLLHQIFQAGLMQDNPTINFLEEYARIVLKKNI
ESLHACGVNENDIFNTLVEAIPKLINWINLFKDSQDSKAPIIDFGPDNGLKKLSIYEVID
IEEMAWAPKYGLKGMIDASVRVKVESGRDKADEKIVPLEFKTGKVSNGQSSMEHVAQVIL
YTLLMSERYLKHIDSGLLYYLQSDQTQGITVQRSDVVGLIMRRNELANDILKASRTQQLP
PMLQSLNMCRSCRHLDVCTIYHKVNGGSRESSGLGDLFDSHVHHLTTAHYVFLRHWDQLI
DLEAKETQLVKNRIWRPHSLKSDDSTSCLSFVVLDTSDRVPYQKSLKDNRFIYRFVHKKM
PLHEVHASGGESLSFPSSSAEDFNYTLKSGDYVIISTKFGHQTVASGFITDISRSHISVS
FPKHLRLPGINSSSEAHDLFREVWQIDKDEFMTSFSVMRFNLVQLFLQSEQSSHLRKMIV
DLEAPRFDSGCIFSQDPALSYIWSVKNLNGDQRRAILKTLTAKDYALILGMPGTGKTSTL
VHAVKAMLMRGASILLTSYTNSAIDNLLIKLKAQAIDFLRIGRHEAVHEEVRANCVFAMD
VHSVEDIKLRLEQVKVVAVTCLGISSPLLANKKFDVCIMDEAGQITLPIALGPLMFASRF
VLVGDHYQLPPLVQSTEARENGMGISLFCRLSEAHPQAISALQSQYRMCQDIMELSNALI
YGDRLRCGSSEIANARLKFSGLQSCSSWLKEVLNPGRPVIFINTDMLPAYEAKDSKTVNN
PIEAYIVAEVTKELLNNGIVGDDIGIITPYNSQANLIRASVNVTSVEIHTIDKYQGRDKE
CILVSFVRSSESPRNCTSSLLGDWHRINVALTRAKKKLILVGSCKTLSKVPLLKLLVEKI
EEQSGIFNVSKIDINYGELKRCSHIR
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaagaagaaatccaagtcgtcttcttcttcaacctcatcagcgaagaaaaac
catcaaaactcacagcagcagcagcaacaacaaccttccaagtttggaatccaacatttc
ttcaatctccacacacaaaacgcactttccctctctcaaaatccccaacctccacccact
ccaattccccaaaccctctctcaaaaccctataatttcccctaattctctaaaccctaaa
tttgcgccaccctccgattctcaccacctcgatgccgacgataacgtgatggatgtctca
cctgaaatcaccaaatcggtgtctctccaacgcttcaagttctctcctggaatgttgata
aagcagagccaggatgatggtggcgatgaggtcacatggaagatatctccggttagtgaa
agactccaagctgtctccaagcaaatgccccaactcattcaactcttagctgaatcttca
aagcttaattctttcagcattcgtccttgttcctctttaaatgatgagatttcatctggt
actgctggcaaggttgataagcagcttccttcacctccatggaagggtgctgacagatct
ttggtgcctgctagtagagttggattgaaaagaataaacccacgtcaggatgtaaatttg
actgatgttaattgctcgcttgctggtcgacaaagtcctttcagaactccgccgtccctt
tcgtattgtcacgaaaagctttctaatgtttctgaatgcaatggagcatcagatcaactg
gatcaaaggcaacacaaaaaggcattgcttgagcttttggatcaagtagaaaatgcaatt
tctgttgaagattcagaacctagtgctgtcaattcatctaaaacacaagatgtaaatggt
tatgacatgccctgcaatgctggatctctagtaaaagaagcagcaatagatccaccagaa
agtgttgctgtgccattgtcaaattataattttcttgtattggaggtatctgagaagcac
aggctcacggattcatctggtgctcaatgcccttataaggttcttcgattgttgaatgag
caaagtggagaagagcgaactgtctatttgcaggaagagtggttctatagtgtcattgca
cctggagatactgtaaatgtgattggtgaatttgatgaccaaggaaagtgtgacgtggat
cgtgacaataatctcttaattgttcatcctgaaattctagtctctggaactcgggttgct
gctagtttcagttgtccacgtcgaactgttttggatgagagactaaaatgcagtgagcat
tcaactgctgcattaattggtaccttgctgcaccaaatttttcaggctggactcatgcaa
gataatcctaccataaactttttggaggaatatgccagaatagtactcaagaaaaatatt
gaaagcctgcatgcatgtggagtaaatgaaaatgatatcttcaatactttggttgaggca
attcctaaactaataaattggatcaacctgttcaaagattcacaggattcaaaagccccc
attattgattttggtcctgacaatggattgaaaaagctaagtatatatgaggtgattgat
atcgaggagatggcatgggccccaaaatatgggttgaaaggaatgattgatgcttctgtc
cgcgttaaagtagagtcaggcagagataaagcagatgagaagattgtgcctctagagttt
aaaactgggaaagtttccaatgggcagtcatccatggaacatgtagcccaagtgattttg
tacactctccttatgtctgagaggtatctgaaacatattgattctggtcttctgtattac
ctccaatcagatcagacacagggaatcactgttcaaaggtctgatgtggttgggctaatc
atgcgtcgaaatgagcttgcaaatgacatccttaaggcatcaagaactcaacaattgcct
ccaatgctacagagcctaaatatgtgcagaagttgccgtcatcttgatgtttgtacaatc
tatcataaggtgaatggtggaagcagggagagtagtggactaggtgatctgtttgattca
catgttcatcatctgacaactgctcattatgttttccttcgacactgggatcagttgatt
gacttagaggctaaagagacacagcttgtgaaaaacagaatatggcgtccacatagtttg
aagagtgatgattccactagttgcctttcttttgttgttcttgatacttcagatcgagtt
ccatatcagaaatctctcaaagacaaccgattcatttatcgttttgtccataaaaaaatg
cctcttcatgaagtgcatgcttctggtggagaatctttgagttttccttcttcttcggca
gaagatttcaattatacacttaaaagtggagactatgtgattattagtacgaaatttggc
catcaaactgtagcaagtgggttcataacagatatcagtcggtcccatatttctgtttct
tttcctaagcacttaagactccctggcatcaattcttcatcagaagcacatgatctcttt
agggaggtctggcagattgacaaggacgagtttatgacttcattttcagttatgcggttc
aaccttgtacaactgtttctccaaagtgaacaaagttctcaccttaggaagatgattgtt
gatcttgaggctcctcgatttgacagtggatgtatatttagtcaagatccagccctatct
tatatatggtcagtgaagaatttaaatggagatcagcgtcgggcaattctgaagactctt
acagctaaggattatgctctaatactagggatgcctggaactggaaagacatcgaccttg
gtacatgctgtcaaggccatgttgatgagaggtgcatccattttgctcacgtcctacaca
aactctgcaattgataatttactaatcaaattaaaagctcaggctattgattttctacga
attggaagacatgaagctgtccatgaggaagtccgtgccaattgcgtttttgcaatggat
gtacacagtgtagaagacattaaattaagattagagcaagtcaaggttgttgcagtaacc
tgcttggggatttctagtcccttgcttgccaacaagaaatttgatgtatgcattatggat
gaagctggacaaattaccctcccaatagctttgggacccttgatgtttgcttcaaggttt
gttcttgttggtgatcactatcaactgcctccacttgtccagagtacagaggctcgcgag
aatggaatggggataagtttgttttgtaggctttctgaggcacatcctcaagcaatttca
gctttgcaaagccagtaccgcatgtgtcaagacattatggaactatcaaatgccttgata
tatggtgacaggctgcgttgtggttcttctgaaatagcaaatgccaggcttaaattttca
ggtttacagtcttgttcatcgtggctaaaggaggtattaaatcctggcagacccgtcata
tttattaacacagatatgctgccagcttacgaggcaaaggactccaaaactgtgaataac
ccaatagaagcttacatagttgcagaggtcacaaaggaattacttaataatgggattgta
ggtgatgatattggcattattaccccttataattcccaggcaaatctcatccgagcttct
gttaacgtaacctctgtggagattcataccattgataaataccagggaagagacaaggaa
tgcatactggtatcctttgttaggtccagtgaaagtccaagaaattgtacttcttcgttg
cttggagattggcataggattaatgtggcactcacacgagccaagaaaaagttgatctta
gtagggtcgtgcaaaaccctgtcaaaggtcccgctgctgaagcttcttgttgagaagatt
gaagagcaatcaggcattttcaatgtgtccaagatagatatcaactatggagagctgaaa
agatgttctcatatcagatga
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