Populus alba (white poplar): 118045475
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Entry
118045475 CDS
T07314
Name
(RefSeq) protein HIRA-like isoform X1
KO
K11293
protein HIRA/HIR1
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118045475
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118045475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_ELP1_1st
Beta-prop_IFT140_2nd
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
118045475
NCBI-ProteinID:
XP_034910016
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Position
9:11489780..11534565
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AA seq
1040 aa
AA seq
DB search
MIAEKPSWVRHEGMQIFSIDIQPGGHRFATGGGDHKVRIWNMNSVSRNLEINEPTQRLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNFTNAQELKAAQVGWTNGASKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT
VATFHFDAKELGHRLSDTELDELKRSRYGDVRGRQANLAESAAQLLLEASTKETTNKKAA
LDIQQSQIPVKSSVDLGVTAKTSDAQVDDGKKSVGAAGDGLNKLPASARISSPVKQREYR
RADGRKRIIPEALGVPNQPETMTGGAQSQALDFPLAASDHRKVENGIVPVDGGLRESSIR
GTLGRNSDIKERSGVNARATVTESLVIEKVPGSAGGDGSINVQQSGIKASSSSGSCNTPL
SIRVFDKKLGEDATPICLEARSREHAVNDVVGVGSTSMMKETEIVCTRGAETLWSDRISG
KVTVLAGNANFWAVGCEDGCLQVYTKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGS
LYVWDLFSRNCLLQDSLASLITSDPNSAKGTIKVISVKLSKSGSPLVVLATRHAFLFDMS
LMCWLRVADDCFPASNFASSWNLSSIQSGELAALQVDVRKYLARKPSWSRVTDDGVQTRA
HLEAQLESSLALKSPNEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMAESTSSDT
KMVSWDPCVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYGSVETNQKTPVLRT
TSQQATSQMNCDPPVTEQMDTAPQAIDHTNAAQPAKDHEDPTPIITDEADHIPLAIDEVD
LCPMVTDQVIQDSLDREAGS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagaaaccaagttgggtcaggcatgagggaatgcaaattttctccattgat
attcaacctggtggccacaggtttgctaccggcggaggtgatcacaaggttcggatatgg
aacatgaactctgttagcaggaacttggaaattaacgaaccaacacaaaggcttcttgca
actctccgcgaccacttcgggtcagtcaattgtgttagatgggctaagcatggtcggtat
gttgcatccgggtctgatgatcaagtgattttagtgcatgaaaggaagcctggttctgga
actacagagtttggcagcggagagcctcctgatgttgaaaattggaaagttgcaatgaca
ttgagagggcacactgcagatgtggtggatcttaattggtctccagatgactccatattg
gctagtgggagtttggacaacactatccatatctggaatatgagcaatggcatttgcact
gctgttcttagaggtcattcgagcctggttaaaggagttacttgggatccaattgggtct
ttcatagcaagtcaatctgatgataagacagttattatatggcgaacaagtgactggagt
ctggctcacagaacagatggccactgggctaaatcacttggatctacatttttcaggcgc
ttaggatggtccccctgtggtcattttataactacaactcatggttttcagaagccaagg
cattctgcacctgttcttgagagaggggaatgggctgccacatttgatttcttaggacac
aatgcccccattattgtggtgaaatttaaccattcaatgtttagaagaaattttaccaat
gctcaggaattgaaagctgcacaagttgggtggactaatggggcctcaaagattggaggg
aaagaatcacagccatacaatgttattgcaattgggagtcaagatcgcactataactgta
tggacgactgcaagtcctcgtcctctttttgtggccaagcacttctttactcaaagtgtt
gtagatttatcctggagtcctgatgggtattcactttttgcatgttccttggatggtact
gtggctactttccattttgatgctaaagaacttggacacaggctaagcgatactgaactt
gatgagttaaaaagaagtcgttatggtgatgtcagaggtagacaggcaaacctagctgag
agtgctgcacagttattgcttgaagcatcaaccaaagaaacaacaaataaaaaagcagca
ttggatattcagcaaagtcaaatacctgtaaaatcttctgttgacttaggggtcactgca
aagacttctgatgcacaagttgatgatggcaagaagagtgtgggagctgctggtgatgga
ttaaataaattgcctgcttctgctcggatttctagtccagtaaaacaaagagaatacaga
cgcgctgatggtagaaagagaatcattccagaagctttaggagtgcccaatcaaccagaa
acaatgaccggtggggctcagtctcaagctcttgatttccctcttgcggcatctgatcac
agaaaggttgaaaatggaatagttcctgttgatggtggcttgcgagagagttctatcagg
ggaacacttggcagaaactctgatataaaagagcgctctggtgtcaatgcaagggctact
gttactgagagcctggtcattgagaaggttccaggatctgcaggaggagatggaagcatt
aatgtgcaacagtctgggataaaggcatctagttcctctggttcttgcaacacccctctc
tcaattagggtatttgataagaaattaggggaagatgccacaccaatttgcttggaagct
cgttctagagaacatgcagtgaatgatgttgttggggtggggagtacaagtatgatgaaa
gaaacagaaattgtttgcacaagaggagctgaaactctttggtctgataggatctcagga
aaagttactgttttagctggaaatgcaaacttctgggcagttgggtgtgaggatggatgc
ctacaggtttacacgaagtgcgggagacgtgccatgcccactatgatgatgggatctgca
gcaacttttgttgattgtgatgagtgctggaagttgttgctggtcacaaggaagggatcc
ttgtatgtatgggatctgtttagtcggaattgtctccttcaggattctttggcatctcta
attacctcagacccaaactctgcaaaaggtacaatcaaagttatatctgtgaagttatca
aaatccggttctcctcttgttgtcctggccacacgtcatgccttcctctttgacatgagt
cttatgtgttggctgagagtggctgatgactgcttccctgcatcgaattttgctagctct
tggaatttgagttcgattcagagtggtgagctagctgcattgcaggtggatgtgaggaaa
tatttggccagaaaaccaagttggagcagagtgacagatgatggggtgcagacacgagct
catttggaggctcagttggaatcctcgttagctttaaagtcccctaatgaatatcgccag
tgccttctatcttacattcgcttccttgcaagagaagcagacgagtctcgtttacgagaa
gtatgtgagagctttcttggacctcctactgggatggctgaatctacatcttcagataca
aaaatggtgtcttgggatccttgtgtgcttggaatgagaaaacacaaactcttaagagaa
gatattcttcctgcaatggcatcaaacagaaaagtccaacgtttactaaatgagttcatg
gatctcttgtctgaatatggaagtgtagaaactaaccaaaaaacccccgtgctacgaact
acatctcaacaagcaaccagtcaaatgaattgtgatccaccagtaacagagcaaatggac
actgccccacaagcaatagatcatacaaacgctgcccaaccagcaaaagatcatgaggac
ccaacccccattataactgatgaagcagaccatattccgctggctattgatgaagtagat
ttgtgcccgatggtaacagatcaagttattcaggattcacttgacagagaagctggttct
tga
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