Entry |
|
Name |
(RefSeq) uncharacterized protein isoform X1
|
KO |
K13168 | CLK4-associating serine/arginine rich protein |
|
Organism |
palz Populus alba (white poplar)
|
Brite |
KEGG Orthology (KO) [BR:palz00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:palz03041]
118045762
Spliceosome [BR:palz03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
118045762
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5:11578159..11584009
|
AA seq |
555 aa
MWHEARRSERKVHDLMDAARKRAQRRAVYLAKRRGDPMQSIQVIGNRSRLYRDDGLYQAT
QDQQGLIPWNGKQDVLIDRFDGRALLDFIREFGTRRAPQKSEEEEELEEFVNFQRYRDLI
KHRRRGFTDEEGLQHVHLELEAKLTASFASNSNSQPQQPPASKGPYSQVGFSYDGDGKEE
FHFSDGDHSESEDDDDDDEDFNSDDSNDEGMERIAKEFGVKRYGWLVYMDKKAKEEEKRQ
KEVIKGDPAIRKLSRKERRKASQIEREREREAARITGTRVLHHDPYREPRRSPTYEAYSR
SRKVRSRSRSFSPSHSRRYTRGGHPDQVHRGKPRTPKIEYITEFGAPGDRDEPKREGYSP
PSSPLSQADLLNRPSSCHILEALHIDPASGVSLDNDKSTKASKSAVSTPSGLAKLTKAST
SGGPLKQQQGEKKETPQERLKRIMSKQLNKQIKKDTAAESAKKREQDRQRQAKLAETNQL
SRYRRRSRSRSYSNSPPRRYRSSRSRSRSRSRSSRRYHSRSRSRSRSRSRSRSRTHTQSR
SPCSRSPRVRSRSRY |
NT seq |
1668 nt +upstreamnt +downstreamnt
atgtggcacgaagcgagaagatcagagaggaaagtacacgacttgatggacgccgctcga
aagagagcgcaacgacgagccgtttatttggcgaagagaagaggcgatccaatgcaatcc
attcaagttatcggcaatcgatctcgcttgtatcgtgacgatggtctctatcaggccaca
caagaccagcaaggcctgataccttggaatggaaaacaggatgttctaattgacagattt
gatggtcgtgctttacttgattttattcgggagtttgggacccgacgggccccacagaaa
tcagaagaagaagaagaactagaagagtttgttaattttcagcgttatcgggatttaatt
aagcatcgacgtagaggatttactgatgaagagggtttgcaacatgtacatctagagctt
gaggcaaagcttactgcctcatttgcttcaaacagtaattctcagccacaacaacccccc
gctagcaaaggtccttattcacaagttggcttttcttatgatggggatggaaaagaggaa
ttccatttttcagatggtgatcacagtgaaagtgaagatgacgatgatgacgacgaggat
tttaatagcgatgacagcaatgatgaaggaatggagagaatagcaaaagaatttggagtg
aaaaggtatggttggcttgtttacatggataaaaaagcaaaagaagaagagaaaagacag
aaggaagtgatcaaaggtgatcctgcaattaggaaattgagtcgcaaggaaagaaggaaa
gcttctcagatagaaagggaaagagagagagaggctgctaggataacaggaacaagagtg
ctccatcatgatccctaccgtgaacctagacgaagtccaacttatgaagcttattctcgc
tccagaaaagtgagatcaagatcacgctcattttcaccatcacactcaaggcgttatact
cgtggagggcatcctgatcaagttcaccgtggtaaaccaaggactcctaagatagaatac
atcacagaatttggggcccctggtgacagggatgagccaaagcgggaaggatattctcca
ccgtcatctcctctatcacaggctgatttgttaaaccggccatcatcatgtcacatactt
gaagcactgcatattgatcctgcatctggtgtgtcccttgataatgataagagcacaaaa
gcatcaaaatcagcagtaagcacaccatcaggattagcaaaattaaccaaggcaagtact
tctgggggacctttgaagcagcaacaaggagagaaaaaagaaactcctcaggagagactc
aaaaggatcatgagcaaacagctaaacaaacaaattaaaaaagataccgctgctgaatcg
gccaagaaacgagaacaggatcgccagaggcaggcaaaacttgcagaaacaaatcaactg
agtcgatatagacgtcgcagccgtagccggagctacagtaattctccaccaagaagatac
aggtccagtagaagtcgaagccggagtcgaagtaggagttctcgaagatatcattcccgc
tcccgctccagatcccgctcccgctcccgctcccgctcccgaacacacacccagtcccgc
tctccttgttcccgctcaccaagggtaagaagccgatcgagatactga |